Evidence map›Paper›PMID 41350615›Full record

ArticleBasic and clinical andrology2025

Evaluation of the semen microbiome for fertility in men with obesity using next-generation sequencing.

Elzem Nisa Alkan, Neslihan Hekim, Sezgin Gunes, Ramazan Asci, Ralf Henkel

Abstract read
In one paragraph

Article in Basic and clinical andrology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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0citing papers in PubMed
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1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Elzem Nisa AlkanDepartment of Medical Biology, Faculty of Medicine, Ondokuz Mayis University, Samsun, 55139, Turkey.ORCID http://orcid.org/0000-0002-6988-0988
Neslihan HekimDepartment of Medical Biology, Faculty of Medicine, Ondokuz Mayis University, Samsun, 55139, Turkey.ORCID http://orcid.org/0000-0002-8470-2848
Sezgin GunesDepartment of Medical Biology, Faculty of Medicine, Ondokuz Mayis University, Samsun, 55139, Turkey. sgunes@omu.edu.tr.ORCID http://orcid.org/0000-0002-3103-6482
Ramazan AsciDepartment of Urology, Faculty of Medicine, Ondokuz Mayis University, Samsun, Turkey.ORCID http://orcid.org/0000-0002-2119-8963
Ralf HenkelLogixX Pharma, Reading, Berkshire, England, UK.ORCID http://orcid.org/0000-0003-1128-2982

Funding

Ondokuz Mayis Üniversitesi PYO.TIP.1904.22.022
6 · The paper itself

Abstract

backgroundThe study aimed to evaluate the microbial content and diversity in semen samples of men with obesity, determine the differences between infertile and fertile groups, and investigate the effect of seminal microbiota on semen parameters, sperm DNA fragmentation, sperm chromatin condensation, and total antioxidant capacity.

resultsThe study included thirteen infertile men with obesity as subjects and five fertile men with obesity as the control group (aged 18-55 years, body mass index > 30 kg/m²). The most abundant bacteria in both groups were seen to be belonging to the phylum of Bacillota, Pseudomonadota, Actinomycetota and Bacteroidota. The most common bacteria at the genus level were Pseudescherichia, Staphylococcus, Paenibacillus, Streptococcus, Klebsiella, and Moraxella, which had similar distributions in both groups. A negative correlation was observed between the percentage of aniline-positive sperm and motility (p < 0.0001), sperm concentration (p = 0.0001) and total sperm count (p = 0.001). It was found that Brevibacterium, Paenibacillus, Alistipes, Lactiplantibacillus, Rhizobacter, Sphingomonas and Venlonella genera were correlated with sperm DNA fragmentation; Pantoea, Devosia, Bacteroides, Acidovorax were correlated with total antioxidant capacity, Fusobacterium was correlated with the histone-rich sperm, and Corynebacterium, Hydrogenophaga, and Paenalcagenes were associated with body mass index.

conclusionBacterial species in semen may play a role in male infertility by affecting semen quality, sperm DNA fragmentation or total antioxidant capacity.

Indexed as

Male infertilityMicrobiomeObesitySperm chromatin condensationSperm DNA fragmentationTotal antioxidant capacity

Identifiers

PMID41350615
PMCPMC12679728

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.