Evidence map›Paper›PMID 41350470›Full record

ArticleNature metabolism2025

Pathway coessentiality mapping reveals complex II is required for de novo purine biosynthesis in acute myeloid leukaemia.

Amy E Stewart, Derek K Zachman, Pol Castellano-Escuder, Lois M Kelly, Ben Zolyomi, Michael D I Aiduk, Christopher D Delaney, Ian C Lock, Claudie Bosc, John Bradley and 9 more

Abstract read
In one paragraph

Article in Nature metabolism, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

19 authors.

Amy E Stewart *Department of Pharmacology & Cancer Biology, Duke University School of Medicine, Durham, NC, USA.
Derek K Zachman *Duke Molecular Physiology Institute and Sarah W. Stedman Nutrition and Metabolism Center, Duke University School of Medicine, Durham, NC, USA.
Pol Castellano-EscuderDuke Molecular Physiology Institute and Sarah W. Stedman Nutrition and Metabolism Center, Duke University School of Medicine, Durham, NC, USA.
Lois M KellyINSERM U1342, IRSL, Saint-Louis Hospital, Paris Cité University, Paris, France.
Ben ZolyomiDepartment of Pharmacology & Cancer Biology, Duke University School of Medicine, Durham, NC, USA.
Michael D I AidukDepartment of Pharmacology & Cancer Biology, Duke University School of Medicine, Durham, NC, USA.
Christopher D DelaneyDepartment of Pharmacology & Cancer Biology, Duke University School of Medicine, Durham, NC, USA.
Ian C LockDepartment of Pharmacology & Cancer Biology, Duke University School of Medicine, Durham, NC, USA.
Claudie BoscDepartments of Medicine and Robert H. Lurie Cancer Center, Northwestern University Feinberg School of Medicine, Chicago, IL, USA.
John BradleyDepartment of Biostatistics & Bioinformatics, Duke University School of Medicine, Durham, NC, USA.ORCID http://orcid.org/0000-0003-3858-848X
Shane T KillarneyDepartment of Pharmacology & Cancer Biology, Duke University School of Medicine, Durham, NC, USA.
J Darren StuartDuke Molecular Physiology Institute and Sarah W. Stedman Nutrition and Metabolism Center, Duke University School of Medicine, Durham, NC, USA.
Paul A GrimsrudDuke Molecular Physiology Institute and Sarah W. Stedman Nutrition and Metabolism Center, Duke University School of Medicine, Durham, NC, USA.ORCID http://orcid.org/0000-0002-4706-914X
Olga R IlkayevaDuke Molecular Physiology Institute and Sarah W. Stedman Nutrition and Metabolism Center, Duke University School of Medicine, Durham, NC, USA.ORCID http://orcid.org/0000-0002-9779-0883
Christopher B NewgardDepartment of Pharmacology & Cancer Biology, Duke University School of Medicine, Durham, NC, USA.ORCID http://orcid.org/0000-0002-1293-691X
Navdeep S ChandelDepartments of Medicine and Robert H. Lurie Cancer Center, Northwestern University Feinberg School of Medicine, Chicago, IL, USA.ORCID http://orcid.org/0000-0001-7208-3886
Alexandre Puissant *INSERM U1342, IRSL, Saint-Louis Hospital, Paris Cité University, Paris, France. alexandre.puissant@inserm.fr.ORCID http://orcid.org/0000-0002-3997-9282
Kris C Wood *Department of Pharmacology & Cancer Biology, Duke University School of Medicine, Durham, NC, USA. kris.wood@duke.edu.ORCID http://orcid.org/0000-0002-5887-2253
Matthew D Hirschey *Department of Pharmacology & Cancer Biology, Duke University School of Medicine, Durham, NC, USA. matthew.hirschey@duke.edu.ORCID http://orcid.org/0000-0003-4541-5376

Funding

Women's Cancer Research ProgramP30CA014236 · NCI · DUKE UNIVERSITY · PI Laura Fish · 1985 to 2026
$174.8M
Medical Scientist Training Program Training GrantT32GM145449 · NIGMS · DUKE UNIVERSITY · PI Christopher D Kontos · 2022 to 2026
$6.6M
Studies on the Mechanisms by which SIRT5 Regulates Aging and DiseaseR01AG045351 · NIA · DUKE UNIVERSITY · PI HIRSCHEY, MATTHEW D · 2014 to 2023
$4.4M
Unified Program for Therapeutics in Children (UPTiC)T32HD094671 · NICHD · DUKE UNIVERSITY · PI Ian J Davis, Kanecia Obie Zimmerman · 2019 to 2026
$2.9M
Lineage-specific signaling and targeting of PI3K gamma in myeloid malignanciesR01CA266389 · NCI · DUKE UNIVERSITY · PI Kris C. Wood · 2022 to 2026
$2.0M
Metabolic regulation of oxidative phosphorylation in pediatric AML relapseK38CA282963 · NCI · DUKE UNIVERSITY · PI ZACHMAN, DEREK · 2024 to 2025
$207k
Defining the Mechanistic Determinants of Response to Selective Electron Transport Chain Inhibition in CancerF31CA254127 · NCI · DUKE UNIVERSITY · PI STEWART, AMY ELIZABETH · 2021 to 2022
$77k
NCI NIH HHS F31 CA254127NCI NIH HHS K38 CA282963NCI NIH HHS P30 CA014236NCI NIH HHS R01 CA266389NIA NIH HHS R01 AG045351NICHD NIH HHS T32 HD094671NIGMS NIH HHS T32 GM145449U.S. Department of Health & Human Services | NIH | Eunice Kennedy Shriver National Institute of Child Health and Human Development (NICHD) T32HD094671U.S. Department of Health & Human Services | NIH | National Cancer Institute (NCI) 1K38CA282963U.S. Department of Health & Human Services | NIH | National Cancer Institute (NCI) F31CA254127U.S. Department of Health & Human Services | NIH | National Cancer Institute (NCI) R01CA266389U.S. Department of Health & Human Services | NIH | National Institute on Aging (U.S. National Institute on Aging) R01AG045351
6 · The paper itself

Abstract

Understanding how cellular pathways interact is crucial for treating complex diseases like cancer. Individual gene-gene interaction studies have provided valuable insights, but may miss pathways working together. Here we develop a multi-gene approach to pathway mapping which reveals that acute myeloid leukaemia (AML) depends on an unexpected link between complex II and purine metabolism. Through stable-isotope metabolomic tracing, we show that complex II directly supports de novo purine biosynthesis and that exogenous purines rescue AML cells from complex II inhibition. The mechanism involves a metabolic circuit where glutamine provides nitrogen to build the purine ring, producing glutamate that complex II metabolizes to sustain purine synthesis. This connection translates into a metabolic vulnerability whereby increasing intracellular glutamate levels suppresses purine production and sensitizes AML cells to complex II inhibition. In a syngeneic AML mouse model, targeting complex II leads to rapid disease regression and extends survival. In individuals with AML, higher complex II gene expression correlates with resistance to BCL-2 inhibition and worse survival. These findings establish complex II as a central regulator of de novo purine biosynthesis and a promising therapeutic target in AML.

Indexed as

Leukemia, Myeloid, AcutePurinesAnimalsCell Line, TumorHumansMicepurinePurines

Identifiers

PMID41350470
PMCPMC12727499

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.