Evidence map›Paper›PMID 41345120›Full record

ArticleScientific data2025

The Basque Coast Estuarine Sediment Gene Catalogue.

Ion L Abad-Recio, Verena Rubel, Sabine Filker, Leire Garate, Thorsten Stoeck, Ramiro Logares, Anders Lanzén

Abstract read
In one paragraph

Article in Scientific data, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Ion L Abad-RecioAZTI, Marine Research, Basque Research and Technology Alliance, Pasaia, Gipuzkoa, Spain. ilabad001@ikasle.ehu.eus.ORCID 0009-0000-5946-4887
Verena RubelEcology Group, Rheinland-Pfälzische Technische Universität Kaiserslautern-Landau, Kaiserslautern, Germany.
Sabine FilkerEcology Group, Rheinland-Pfälzische Technische Universität Kaiserslautern-Landau, Kaiserslautern, Germany.
Leire GarateAZTI, Marine Research, Basque Research and Technology Alliance, Pasaia, Gipuzkoa, Spain.ORCID 0000-0001-9436-1306
Thorsten StoeckEcology Group, Rheinland-Pfälzische Technische Universität Kaiserslautern-Landau, Kaiserslautern, Germany.
Ramiro LogaresInstitute of Marine Sciences (ICM) - CSIC, Barcelona, Spain.ORCID 0000-0002-8213-0604
Anders LanzénAZTI, Marine Research, Basque Research and Technology Alliance, Pasaia, Gipuzkoa, Spain.

Funding

Deutsche Forschungsgemeinschaft (German Research Foundation) Fi 2089/3-1Deutsche Forschungsgemeinschaft (German Research Foundation) STO 414/19-1
6 · The paper itself

Abstract

Estuaries are critical transition zones that link marine, riverine, and terrestrial ecosystems, including habitats like intertidal mudflats and tidal marshes. These ecosystems are biodiversity hotspots providing essential ecological functions such as nutrient cycling and pollutant removal. Despite their importance, there is a significant knowledge gap regarding the ecological functioning of these habitats and how they are impacted by anthropogenic pressures. From intertidal estuarine benthos along the Basque Coast 92 microbial metagenomic assemblies were retrieved that allowed us to reconstruct 390 medium plus 81 high quality MAGs, along with 108 million putative genes from bacteria, archaea, eukaryotes, and viruses. This unique dataset will enhance our understanding of ecosystem functioning, biodiversity, and be useful to reveal biogeochemical processes and the role of unculturable biomass.

Indexed as

EstuariesGeologic SedimentsArchaeaBacteriaBiodiversityDatasets as TopicEcosystemEukaryotaMetagenomicsViruses

Identifiers

PMID41345120
PMCPMC12678806

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.