Evidence map›Paper›PMID 41343275›Full record

ArticleCell reports2025

NEMO recruitment at single cytokine-receptor complexes shows quantized dynamics independent of ligand affinity.

A Hyun Kim, Benjamin Krummenacher, Jason Yeung, David R Koes, Robin E C Lee

Abstract read
In one paragraph

Article in Cell reports, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

A Hyun KimDepartment of Computational and Systems Biology, School of Medicine, University of Pittsburgh, Pittsburgh, PA 15213, USA.
Benjamin KrummenacherDepartment of Computational and Systems Biology, School of Medicine, University of Pittsburgh, Pittsburgh, PA 15213, USA.
Jason YeungDepartment of Computational and Systems Biology, School of Medicine, University of Pittsburgh, Pittsburgh, PA 15213, USA.
David R KoesDepartment of Computational and Systems Biology, School of Medicine, University of Pittsburgh, Pittsburgh, PA 15213, USA.
Robin E C LeeDepartment of Computational and Systems Biology, School of Medicine, University of Pittsburgh, Pittsburgh, PA 15213, USA; Center for Systems Immunology, School of Medicine, University of Pittsburgh, Pittsburgh, PA 15213, USA; Department of Physics and Astronomy, University of Pittsburgh, Pittsburgh, PA 15213, USA. Electronic address: robinlee@pitt.edu.

Funding

Equipment Supplement for 5R35GM119462: Deciphering dynamic signals in control of cell fate decisionsR35GM119462 · NIGMS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI LEE, ROBIN E. C. · 2016 to 2025
$4.2M
New Methods and Tools for Computational Drug Discovery: Diversity SupplementR35GM140753 · NIGMS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI KOES, DAVID RYAN · 2021 to 2025
$2.2M
NIGMS NIH HHS R35 GM119462NIGMS NIH HHS R35 GM140753
6 · The paper itself

Abstract

Cells use a limited number of receptors to sense and process molecular information from their environment. In the classical view of signaling, receptor-ligand affinities determine binding kinetics, on timescales of diffusion, where their time-averaged contact duration regulates rapid cytoplasmic signaling events to coordinate cellular responses. For some cytokines, single receptor-ligand binding events can initiate large multiprotein complexes in the cytoplasm that assemble over tens of minutes, raising the question of how cytokine affinity influences the sensitivity and strength of signaling. Here, we leverage naturally occurring variations of interleukin (IL)-1β from multiple species to determine the impact of affinity on human IL-1 receptor signaling. Using experiments and models, we investigate single receptor complexes activated by ligands that vary across multiple orders of magnitude in affinity. Our results show that while the receptor-ligand affinity establishes cytokine response sensitivity, activated IL-1 receptor complexes signal as discrete, quantized packets of signaling flux independent of affinity.

Indexed as

Interleukin-1betaReceptors, Interleukin-1HumansI-kappa B KinaseKineticsLigandsProtein BindingSignal TransductionI-kappa B KinaseIKBKG protein, humanInterleukin-1betaLigandsReceptors, Interleukin-1affinityCP: cell biologyCP: molecular biologycross-species protein interactioncytokine structureIl-1R1IL-1βlive-cell imagingreceptor signalingsignal quantizationsingle particle tracking

Identifiers

PMID41343275
PMCPMC12831165

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.