Evidence map›Paper›PMID 41334914›Full record

ArticleApplied and environmental microbiology2025

Metabolic and plasmid engineering to produce D-phenyllactic acid from glucose-xylose co-substrates in

Shuhei Noda, Yutaro Mori, Akihiko Kondo, Daisuke Nonaka, Mayumi Dainin, Ryosuke Fujiwara, Tsutomu Tanaka, Michihiro Araki, Tomokazu Shirai

Abstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Applied and environmental microbiology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Shuhei NodaGraduate School of Science, Technology and Innovation, Kobe University, Kobe, Japan.ORCID 0000-0001-5430-1966
Yutaro MoriDepartment of Chemical Science and Engineering, Graduate School of Engineering, Kobe University, Kobe, Japan.
Akihiko KondoGraduate School of Science, Technology and Innovation, Kobe University, Kobe, Japan.
Daisuke NonakaDepartment of Chemical Science and Engineering, Graduate School of Engineering, Kobe University, Kobe, Japan.
Mayumi DaininCenter for Sustainable Resource Science, RIKEN, Yokohama, Kanagawa, Japan.
Ryosuke FujiwaraCenter for Sustainable Resource Science, RIKEN, Yokohama, Kanagawa, Japan.
Tsutomu TanakaDepartment of Chemical Science and Engineering, Graduate School of Engineering, Kobe University, Kobe, Japan.ORCID 0000-0002-7397-7360
Michihiro ArakiGraduate School of Pharmacy, Ritsumeikan University, Kusatsu, Shiga, Japan.
Tomokazu ShiraiCenter for Sustainable Resource Science, RIKEN, Yokohama, Kanagawa, Japan.

Funding

Japan Science and Technology Agency JPMJPR22N9Japan Society for the Promotion of Science 23H04565Japan Society for the Promotion of Science 25H01701Japan Society for the Promotion of Science JP25K00054Japan Society for the Promotion of Science JP25K01594
6 · The paper itself

Abstract

Plasmid DNA comprises various modules, including promoter and terminator regions, replication origins, and antibiotic resistance genes as selection markers. The 5'UTRs of the promoter and ribosome binding site (RBS) have been extensively studied, and multiple synthetic promoters and RBSs have been developed. In this study, we focused primarily on the components of plasmid vectors in

Indexed as

Escherichia coliGlucoseLactatesMetabolic EngineeringPlasmidsXyloseCupriavidus necator3-phenyllactic acidGlucoseLactatesXyloseD-phenyllactic acidEscherichia coligene expressionmetabolic engineeringplasmid componentsxylose assimilation

Identifiers

PMID41334914
PMCPMC12724218

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.