Evidence map›Paper›PMID 41333439›Full record

ArticleResearch square2025

Deep Learning for Time-Series Segmentation of Mechanical Ventilator Waveforms.

Preeti Gupta, Aditya Nemani, Virginia R de Sa, Alex K Pearce, Shamim Nemati, Atul Malhotra, Jason Y Adams

Abstract readPreprint
In one paragraph

Article in Research square, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

7 authors.

Preeti GuptaScripps Research Translational Institute.
Aditya NemaniUniversity of California San Diego.
Virginia R de SaUniversity of California San Diego.
Alex K PearceUniversity of California San Diego.
Shamim NematiUniversity of California San Diego.
Atul MalhotraUniversity of California San Diego.
Jason Y AdamsUniversity of California Davis.

Funding

CTSA K12 Program at The Scripps Research InstituteK12TR004410 · NCATS · SCRIPPS RESEARCH INSTITUTE, THE · PI Laura Nicholson, Athena Philis-Tsimikas · 2023 to 2026
$3.9M
NCATS NIH HHS K12 TR004410
6 · The paper itself

Abstract

Accurate segmentation of ventilator waveforms is essential for detecting patient-ventilator asynchronies (PVAs), yet current heuristic methods can fail in noisy, real-world data. We developed and validated a deep learning model using a one-dimensional attention-gated U-Net architecture to identify inspiratory and expiratory onsets in mechanical ventilation waveforms. The model was trained and tested on 9,719 breaths from 33 patients and outperformed published rule-based methods, achieving F1 scores of > 0.99 for both inspiratory and expiratory onset detection within a 0.1-second tolerance window. Performance remained robust in asynchronous breaths (F1 ≥ 0.98). When applied to quantify PVAs, the model reproduced reference standard asynchrony frequencies with no significant differences, whereas heuristic methods produced large deviations. Gradient-weighted class activation maps suggest that the model leveraged a diverse set of waveform features to inform segmentation. This computationally efficient model enables highly-accurate, real-time waveform analysis and provides a foundation for scalable, reproducible assessment of ventilator-patient interactions.

Identifiers

PMID41333439
PMCPMC12668170

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.