Evidence map›Paper›PMID 41333395›Full record

ArticleResearch square2025

Nucleosome stability safeguards cell identity, stress resilience and healthy aging.

Peter Adams, Hiroshi Tanaka, Brenna McCauley, Clara Guida, Xue Lei, Sha Li, Tatiana Moreno, K'leigh Guillotte, Zong Chua, Adrianna Abele and 12 more

Abstract readPreprint
In one paragraph

Article in Research square, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

22 authors.

Peter AdamsSanford Burnham Prebys Medical Discovery Institute.ORCID 0000-0002-0684-1770
Hiroshi TanakaSanford Burnham Prebys Medical Discovery Institute.
Brenna McCauleyBaylor College of Medicine.
Clara GuidaSanford Burnham Prebys Medical Discovery Institute.
Xue LeiSanford Burnham Prebys MDI.
Sha LiSanford Burnham Prebys Medical Discovery Institute.
Tatiana MorenoSanford Burnham Prebys Medical Discovery Institute.ORCID 0000-0002-7466-2491
K'leigh GuillotteSanford Burnham Prebys Medical Discovery Institute.
Zong ChuaSanford Burnham Prebys Medical Discovery Institute.
Adrianna AbeleSanford Burnham Prebys Medical Discovery Institute.
Aashna LambaSanford Burnham Prebys Medical Discovery Institute.
Rouven ArnoldSanford Burnham Prebys Medical Discovery Institute.
Adarsh RajeshSanford Burnham Prebys Medical Discovery Institute.ORCID 0009-0003-4326-7442
Marcos TenecheSanford Burnham Prebys Medical Discovery Institute.ORCID 0000-0003-4785-7987
Laurence HaddadinSanford Burnham Prebys Medical Discovery Institute.ORCID 0009-0006-2359-4288
Anagha DeshpandeSanford Burnham Prebys Medical Discovery Institute.
Aniruddha DeshpandeSanford Burnham Prebys Medical Discovery Institute.
Alexandre ColasSanford Burnham Prebys Medical Discovery Institute.
Caroline KumstaSanford Burnham Prebys Medical Discovery Institute.ORCID 0000-0003-3839-4888
Michael PetrascheckThe Scripps Research Institute.ORCID 0000-0002-1010-145X
Rolf BodmerSanford Burnham Prebys Medical Discovery Institute.
Weiwei DangBaylor College of Medicine.ORCID 0000-0002-6931-4636

Funding

Tumor Microenvironment and Cancer ImmunologyP30CA030199 · NCI · SANFORD BURNHAM PREBYS MEDICAL DISCOVERY INSTITUTE · PI ELENA B PASQUALE · 1985 to 2026
$107.2M
Viral Vector Core (VVC)P30CA014195 · NCI · SALK INSTITUTE FOR BIOLOGICAL STUDIES · PI Alan Saghatelian · 1985 to 2026
$82.8M
STRUCTURAL BASIS FOR EPIGENETICS IN AGING AND LONGEVITYP01AG031862 · NIA · WISTAR INSTITUTE · PI ZHANG, RUGANG · 2008 to 2022
$28.3M
Project 4: Interrogating and harnessing age-related IFN signaling and innate immunity in HCC prevention and therapyP01AG073084 · NIA · SANFORD BURNHAM PREBYS MEDICAL DISCOVERY INSTITUTE · PI PETER D. ADAMS, GERALD SHADEL · 2021 to 2026
$13.6M
San Diego Nathan Shock CenterP30AG068635 · NIA · SALK INSTITUTE FOR BIOLOGICAL STUDIES · PI SHADEL, GERALD · 2020 to 2024
$6.0M
Using geroscience to understand and treat Alzheimer's diseaseR01AG069206 · NIA · SALK INSTITUTE FOR BIOLOGICAL STUDIES · PI MAHER, PAMELA ANNE · 2020 to 2024
$4.0M
Defining chromostasis - a candidate regulator of healthy aging and longevityR01AG071464 · NIA · SANFORD BURNHAM PREBYS MEDICAL DISCOVERY INSTITUTE · PI ADAMS, PETER D. · 2020 to 2024
$3.9M
Cytoplasmic chromatin fragments in cell senescence - novel mechanisms and interventionsR01AG071861 · NIA · SANFORD BURNHAM PREBYS MEDICAL DISCOVERY INSTITUTE · PI ADAMS, PETER D. · 2021 to 2025
$2.3M
Genetic Pathways in Ceramide-Associated Lipotoxic Cardiomyopathy and Heart FailureR01HL149992 · NHLBI · SANFORD BURNHAM PREBYS MEDICAL DISCOVERY INSTITUTE · PI BODMER, ROLF · 2020 to 2023
$1.9M
Hormetic regulation of autophagy in agingR01AG083373 · NIA · SANFORD BURNHAM PREBYS MEDICAL DISCOVERY INSTITUTE · PI Caroline Kumsta · 2024 to 2026
$1.7M
Molecular mechanisms of cellular response to age-associated chromatin changesR01AG081347 · NIA · BAYLOR COLLEGE OF MEDICINE · PI Weiwei Dang · 2023 to 2026
$1.4M
Illumina NovaSeq 6000 Sequencing SystemS10OD026929 · OD · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI JEPSEN, KRISTEN LYNN · 2019 to 2019
$600k
NCI NIH HHS P30 CA014195NCI NIH HHS P30 CA030199NHLBI NIH HHS R01 HL149992NIA NIH HHS P01 AG031862NIA NIH HHS P01 AG073084NIA NIH HHS P30 AG068635NIA NIH HHS R01 AG069206NIA NIH HHS R01 AG071464NIA NIH HHS R01 AG071861NIA NIH HHS R01 AG081347NIA NIH HHS R01 AG083373NIA NIH HHS R21 AG075446NIH HHS S10 OD026929NIH HHS S10 OD036254
6 · The paper itself

Abstract

The Information Theory of Aging (ITOA) proposes that aging results from the progressive loss of epigenetic information. As the repeating units of the epigenome, nucleosomes are considered pivotal for its stability. Accordingly, the ITOA predicts that destabilization of nucleosomes will accelerate aging. However, this causal link has not been directly tested. Here, we addressed this through histone mutants that weaken histone-histone interactions. Without broadly perturbing steady-state chromatin accessibility, DNA damage, cell proliferation or viability, nucleosome instability compromised cell identity maintenance, altered lineage specification and activated intrinsic inflammatory and stress pathways in a manner reminiscent of aging in mouse tissues and human cells. Consistently, nucleosome instability accelerated age-associated transcriptional alterations and functional decline in Caenorhabditis elegans and Drosophila melanogaster, and reduced cellular resilience to exogenous perturbations-including environmental, epigenetic and mitotic stress-in human cells and Saccharomyces cerevisiae. These cross-species findings establish nucleosome stability as a fundamental requirement for preserving cell identity and stress resilience, thereby safeguarding organismal longevity.

Identifiers

PMID41333395
PMCPMC12668177

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.