Evidence map›Paper›PMID 41331410›Full record

ArticleScientific reports2025

Comparative transcriptomic and biochemical analyses reveal candidate regulatory genes associated with early drought response signatures in contrasting rapeseed (Brassica napus) cultivars.

Elham Hosseini, Hooman Razi, Ahmad Tahmasebi, Abbas Alemzadeh, Esmaeil Ebrahimie

Abstract readComparative Study
In one paragraph

Article in Scientific reports, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Elham HosseiniDepartment of Plant Production and Genetics, School of Agriculture, Shiraz University, Shiraz, Iran.
Hooman RaziDepartment of Plant Production and Genetics, School of Agriculture, Shiraz University, Shiraz, Iran. razi@shirazu.ac.ir.
Ahmad TahmasebiInstitute of Biotechnology, Shiraz University, Shiraz, Iran.
Abbas AlemzadehDepartment of Plant Production and Genetics, School of Agriculture, Shiraz University, Shiraz, Iran.
Esmaeil EbrahimieGenomics Research Platform, School of Agriculture, Biomedicine and Environment, La Trobe University, Melbourne, VIC, Australia.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Drought stress triggers complex and multilayered physiological, biochemical, and molecular responses contributing to plant stress adaptation mechanisms. In this study, we performed comparative transcriptomic and biochemical analyses between drought-tolerant and drought-sensitive rapeseed (Brassica napus) cultivars to identify candidate early response regulatory genes and molecular pathways associated with enhanced response to drought at the seedling stage. Under drought stress, the tolerant cultivar exhibited higher relative water content, greater proline accumulation, elevated antioxidant enzyme activities, and reduced membrane damage compared to the sensitive cultivar. Transcriptomic profiling revealed distinct early-response gene expression signatures between the cultivars. The cultivar-specific expression patterns of the candidate regulatory genes encoding transcription factors (DREB2A, ABI5, NAC019, ZAT10, MYB15, MYB44), protein kinases (SRK2E, SRK2I), calmodulin-like proteins (CML37, CML40), components of the ubiquitin-proteasome system (RDUF2, PUB23), along with drought-responsive effector genes (NCED3, RD29B, HAI1) may facilitate early activation of abscisic acid (ABA) and calcium signaling pathways, enhance activities of antioxidant enzymes and reactive oxygen species (ROS) detoxification, promote proline accumulation, and potentially improve the efficiency of protein degradation and turnover in the drought-tolerant cultivar. Together, these findings provide valuable insights into candidate genes and regulatory pathways associated with enhanced early drought responses in rapeseed, offering potential targets for genetic improvement through molecular breeding technologies.

Indexed as

Brassica napusDroughtsGene Expression Regulation, PlantStress, PhysiologicalTranscriptomeGene Expression ProfilingPlant ProteinsSeedlingsPlant ProteinsABA signalingCalmodulin-like proteinsProtein kinaseProtein ubiquitinationRNA-seqTranscription factor

Identifiers

PMID41331410
PMCPMC12783290

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.