Evidence map›Paper›PMID 41330960›Full record

ArticleScientific data2025

Near telomere-to-telomere genome assembly of the fourfinger threadfin (Eleutheronema tetradactylum).

Huijuan Zhang, Yifei Pan, Benxun Miao, Linjuan Wang, Anna Zheng, Minxuan Jin, Jiandong Zhang, Baogui Tang, Bei Wang, Jiansheng Huang and 3 more

Abstract readDataset
In one paragraph

Article in Scientific data, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Huijuan ZhangCollege of Fisheries, Guangdong Ocean University, Zhanjiang, China.
Yifei PanCollege of Fisheries, Guangdong Ocean University, Zhanjiang, China.
Benxun MiaoCollege of Fisheries, Guangdong Ocean University, Zhanjiang, China.
Linjuan WangCollege of Fisheries, Guangdong Ocean University, Zhanjiang, China.
Anna ZhengCollege of Fisheries, Guangdong Ocean University, Zhanjiang, China.
Minxuan JinCollege of Fisheries, Guangdong Ocean University, Zhanjiang, China.
Jiandong ZhangCollege of Fisheries, Guangdong Ocean University, Zhanjiang, China.
Baogui TangCollege of Fisheries, Guangdong Ocean University, Zhanjiang, China.
Bei WangCollege of Fisheries, Guangdong Ocean University, Zhanjiang, China.
Jiansheng HuangCollege of Fisheries, Guangdong Ocean University, Zhanjiang, China.
Jing LiCollege of Fisheries, Guangdong Ocean University, Zhanjiang, China.
Dee-Hwa ChongIchthyological Society of Hong Kong, Hong Kong, China.
Zhongliang WangCollege of Fisheries, Guangdong Ocean University, Zhanjiang, China. wangzl@gdou.edu.cn.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The fourfinger threadfin (Eleutheronema tetradactylum) is a euryhaline fish distributed across the Indo-West Pacific, from the Persian Gulf to Australia. However, the lack of high-quality genomic resources has limited genomic-level studies of its evolution, conservation, and aquaculture. Here, we present the first Near telomere-to-telomere (T2T) genome assembly of E. tetradactylum, generated using Pacific Biosciences (PacBio) High-Fidelity (HiFi) sequencing, Oxford Nanopore Technologies (ONT) ultra-long reads, and Hi-C chromatin conformation capture. The final assembly spans 585.38 Mb across 83 contigs, with a contig N50 of 22.14 Mb and 98.76% of sequences anchored to 26 chromosomes. We annotated 22,362 protein-coding genes and identified that repetitive sequences constitute 18.09% of the genome. This high-quality T2T assembly demonstrates significant improvements in contiguity and completeness over previously available genomes, providing an invaluable resource to accelerate genetic research, advance molecular breeding, and inform conservation strategies for E. tetradactylum.

Indexed as

GenomePerciformesTelomereAnimals

Identifiers

PMID41330960
PMCPMC12808797

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.