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ArticleMolecular biology reports2025

Enhanced genetic diversity assessment of Deschampsia Antarctica populations from maritime Antarctica using inter-primer binding site (iPBS) retrotransposon markers.

Olivet Delasi Gleku, Sedat Serçe, Edem Kofi Netsey

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Article in Molecular biology reports, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

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1 citing paper in PubMed.

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5 · Who and what money

Authors and funding

3 authors.

Olivet Delasi GlekuDepartment of Agricultural Genetic Engineering, Faculty of Agricultural Sciences and Technologies, Institute of Natural and Applied Sciences, Niğde Omer Halisdemir University, Niğde, Turkey. olivetdelasi@gmail.com.ORCID http://orcid.org/0000-0003-1597-3908
Sedat SerçeDepartment of Agricultural Genetic Engineering, Faculty of Agricultural Sciences and Technologies, Institute of Natural and Applied Sciences, Niğde Omer Halisdemir University, Niğde, Turkey.
Edem Kofi NetseyDepartment of Mathematics and ICT, Dambai College of Education, Dambai, Ghana.

Funding

Niğde Ömer Halisdemir University's Research Project Unit TGT2024/4-BAGEP.
6 · The paper itself

Abstract

backgroundDeschampsia antarctica, one of only two native vascular plants in Antarctica, provides a model for studying plant adaptation in extreme environments. Despite its ecological significance, genetic data for this species remain limited. Understanding its genetic variability is essential for assessing its adaptive potential amid rapid climate change. This study investigated the genetic diversity and population structure of D. antarctica from seven locations across the Antarctic Peninsula using Inter-Primer Binding Site (iPBS) retrotransposon markers. METHODS AND

resultsForty-five iPBS primers generated 1,400 scorable bands, 98.9% of which were polymorphic, indicating the high discriminatory capacity of the markers. Cluster analyses (UPGMA and PCoA) identified two major genetic lineages: Livingston–Ridge and King George–Ardley–Galindez–Lagotellerie populations, with pairwise similarities ranging from 0.994 to 0.999. AMOVA showed that 96% of total genetic variation occured within populations, reflecting substantial intra-population diversity and minimal inter-populations. The low inter-population differentiation likely reflects recent post-glacial expansion (~ 10,000 years ago), clonal propagation, and polyploid buffering, which maintain within-population variation while limiting divergence.

conclusionThese results exceed previous diversity estimates, showing that D. antarctica maintains extensive genetic variation despite environmental isolation. The study demonstrates the effectiveness of iPBS markers in resolving fine-scale genetic patterns and provides new insights into the evolutionary dynamics, population structure, and conservation strategies for Antarctic flora under changing climatic conditions.

Indexed as

Genetic VariationPoaceaeRetroelementsAntarctic RegionsBinding SitesDNA PrimersGenetic MarkersGenetics, PopulationPhylogenyPolymorphism, GeneticDNA PrimersGenetic MarkersRetroelementsAntarctic peninsulaGenetic diversityMolecular markersPlant genetic resourcesPopulation geneticsRetrotransposon analysis

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