Evidence map›Paper›PMID 41328325›Full record

ArticleMedComm2025

Discovery of a Novel Non-Nucleoside Inhibitor of RNA-Dependent RNA Polymerase Against Dengue Virus.

Xue-Mei He, Li-Fang Zou, Jing-Tao Yu, Tang-Jia Yang, Zi-Bin Lu, Hui-Hui Cao, Wen Li, Bing Chen, Wei Zhao, Jian-Ping Zuo and 2 more

Abstract read
In one paragraph

Article in MedComm, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Review
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Xue-Mei HeSchool of Traditional Chinese Medicine Guangdong Provincial Key Laboratory of Chinese Medicine Pharmaceutics Guangdong Basic Research Center of Excellence for Integrated Traditional and Western Medicine for Qingzhi Diseases Southern Medical University Guangzhou China.
Li-Fang ZouSchool of Traditional Chinese Medicine Guangdong Provincial Key Laboratory of Chinese Medicine Pharmaceutics Guangdong Basic Research Center of Excellence for Integrated Traditional and Western Medicine for Qingzhi Diseases Southern Medical University Guangzhou China.
Jing-Tao YuSchool of Traditional Chinese Medicine Guangdong Provincial Key Laboratory of Chinese Medicine Pharmaceutics Guangdong Basic Research Center of Excellence for Integrated Traditional and Western Medicine for Qingzhi Diseases Southern Medical University Guangzhou China.
Tang-Jia YangSchool of Traditional Chinese Medicine Guangdong Provincial Key Laboratory of Chinese Medicine Pharmaceutics Guangdong Basic Research Center of Excellence for Integrated Traditional and Western Medicine for Qingzhi Diseases Southern Medical University Guangzhou China.
Zi-Bin LuSchool of Traditional Chinese Medicine Guangdong Provincial Key Laboratory of Chinese Medicine Pharmaceutics Guangdong Basic Research Center of Excellence for Integrated Traditional and Western Medicine for Qingzhi Diseases Southern Medical University Guangzhou China.
Hui-Hui CaoSchool of Traditional Chinese Medicine Guangdong Provincial Key Laboratory of Chinese Medicine Pharmaceutics Guangdong Basic Research Center of Excellence for Integrated Traditional and Western Medicine for Qingzhi Diseases Southern Medical University Guangzhou China.
Wen LiAnalytical and Testing Center Jinan University Guangzhou China.
Bing ChenSchool of Traditional Chinese Medicine Guangdong Provincial Key Laboratory of Chinese Medicine Pharmaceutics Guangdong Basic Research Center of Excellence for Integrated Traditional and Western Medicine for Qingzhi Diseases Southern Medical University Guangzhou China.
Wei ZhaoGuangdong Provincial Key Laboratory of Tropical Disease Research School of Public Health Southern Medical University Guangzhou China.
Jian-Ping ZuoLaboratory of Immunopharmacology State Key Laboratory of Drug Research Shanghai Institute of Materia Medica Chinese Academy of Sciences Shanghai China.
Lin-Zhong YuSchool of Traditional Chinese Medicine Guangdong Provincial Key Laboratory of Chinese Medicine Pharmaceutics Guangdong Basic Research Center of Excellence for Integrated Traditional and Western Medicine for Qingzhi Diseases Southern Medical University Guangzhou China.
Jun-Shan LiuSchool of Traditional Chinese Medicine Guangdong Provincial Key Laboratory of Chinese Medicine Pharmaceutics Guangdong Basic Research Center of Excellence for Integrated Traditional and Western Medicine for Qingzhi Diseases Southern Medical University Guangzhou China.ORCID https://orcid.org/0000-0002-9326-6312

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Dengue virus (DENV) is an acute infectious pathogen worldwide, for which no effective therapeutics are available. The RNA-dependent RNA polymerase (RdRp) displays an important role during DENV replication and is therefore a promising target in the development of antiviral drugs. However, there are still no clinically approved RdRp inhibitors available. In this study, we identified a natural small molecule, 12β-hydroxydammar-3-one-20(S)-O-β-d-glucopyranoside (PN-1), using a surface plasmon resonance-based screening assay. Biochemical and structural analyses revealed that PN-1 selectively targets the RdRp of DENV NS5 protein by covalently modifying residues Glu255, Met387, Glu479, and Ala507. Mechanistic studies involving tryptophan scanning and hydrogen-deuterium exchange mass spectrometry revealed that PN-1 binding regulates RdRp conformational transitions. This allosteric mechanism leads to suppression of enzymatic activity and inhibition of DENV replication. Consequently, PN-1 exhibited potent antiviral activity across various cell lines and conferred significant protection in both ICR suckling and AG129 mouse models. Taken together, our results show that PN-1 functions as a novel non-nucleoside inhibitor to suppress DENV replication by targeting RdRp. These findings highlight PN-1 as a promising anti-DENV lead compound, while revealing conserved RdRp residues as actionable targets for rational drug design.

Indexed as

AG129 micedengue virusICR sucklingRNA‐dependent RNA polymerasetarget

Identifiers

PMID41328325
PMCPMC12664905

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.