Evidence map›Paper›PMID 41327255›Full record

ArticleVirology journal2025

Decoding cross-talk between Mpox and HIV: insights from transcriptomics and network-based analyses.

Saurav Kumar Mishra, Tabsum Chhetri, Sneha Roy, Aamal A Al-Mutairi, Adino Asmare Aragaw, Emad Rashad Sindi, Magdi E A Zaki, John J Georrge

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Article in Virology journal, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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5 · Who and what money

Authors and funding

8 authors.

Saurav Kumar MishraDepartment of Bioinformatics, District-Darjeeling, University of North Bengal, District-Darjeeling, West Bengal, 734013, India.
Tabsum ChhetriDepartment of Bioinformatics, District-Darjeeling, University of North Bengal, District-Darjeeling, West Bengal, 734013, India.
Sneha RoyDepartment of Bioinformatics, District-Darjeeling, University of North Bengal, District-Darjeeling, West Bengal, 734013, India.
Aamal A Al-MutairiDepartment of Chemistry, College of Science, Imam Mohammad Ibn Saud Islamic University (IMSIU), Riyadh, 11623, Kingdom of Saudi Arabia.
Adino Asmare AragawDepartment of Biology, College of Natural and Computational Science, Woldia University, Woldia, Ethiopia. dradinoasmare@gmail.com.
Emad Rashad SindiDivision of Clinical Biochemistry, Department of Basic Medical Sciences, College of Medicine, University of Jeddah, Jeddah, 23890, Saudi Arabia.
Magdi E A ZakiDepartment of Chemistry, College of Science, Imam Mohammad Ibn Saud Islamic University (IMSIU), Riyadh, 11623, Kingdom of Saudi Arabia.
John J GeorrgeDepartment of Bioinformatics, District-Darjeeling, University of North Bengal, District-Darjeeling, West Bengal, 734013, India. johnjgeorrge@gmail.com.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundAt present, the Monkeypox virus (MPXV) outbreak has become a significant public health concern, and its severity is increasing based on different clades globally, which, combined, are leading to severe complications. However, it was observed that MPXV infection was highly expressed in individuals with Human Immunodeficiency Virus (HIV), and the mechanism of cross-talk has not been explored.

methodsThis study employed a network-based methodology to examine the role of differentially expressed genes (DEGs) in HIV and monkeypox (Mpox) infections. The commonly shared DEGs in Mpox and HIV were examined, followed by their functional enrichment, co-expression, transcriptional factor, potential correlation with disease, and promising drug-associated network. Additionally, the docking analysis was accomplished to gain the interaction site of the compound towards these target genes.

resultsThe GEO datasets of Mpox and HIV were examined, wherein a total of 570 Mpox and 642 HIV DEGs were identified. Among them, 41 DEGs were common, and functional enrichment and pathway analysis revealed their involvement in vital biological functions and pathways. Further, the PPI and co-expression analysis of these genes was conducted, which revealed 8 key genes or hub genes, which included SOCS3, NFKBIA, IFIT1, CCNB2, PLK3, PTGS1, ZFP36L2, and RGS16. Moreover, transcription factors (TFs) and miRNAs of the hub genes were also examined, which offered new insight into potential therapeutic targets. The gene-disease network also revealed several other diseases linked to the common and hub genes. Subsequently, the docking analysis revealed that the selected compound actively bound to the target genes and could be a potential lead to combat this.

conclusionsThis study unveils the shared mechanism between HIV and Mpox based on the hub genes perspective, offering new insights into co-infection and highlighting potential possibilities for simultaneous therapeutic intervention in both diseases.

Indexed as

HIV InfectionsHost-Pathogen InteractionsMonkeypox virusTranscriptomeComputational BiologyGene Expression ProfilingGene Regulatory NetworksHumansMolecular Docking SimulationProtein Interaction MapsTranscription FactorsTranscription FactorsCo-expressionCross-talkDEGsHIVMolecular dockingMonkeypoxTranscriptomics

Identifiers

PMID41327255
PMCPMC12777129

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.