Evidence map›Paper›PMID 41327001›Full record

ArticleBMC genomics2025

Independent divergences of the aquaporins across different genera highlight the distinct adaptation mechanisms within Mytilida.

Yanglei Jia, Man Song, Yunwang Shen, Zhongqi Gu, Xinwei Xiong, Mindong Zhou, Xiaojun Yan, Xiao Liu

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Article in BMC genomics, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Not yet cited in PubMed.

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1 · What the graph read from it

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3 · Its place in the literature

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4 · The record

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5 · Who and what money

Authors and funding

8 authors.

Yanglei JiaNational Engineering Research Center for Marine Aquaculture, Zhejiang Ocean University, No. 1 Haida South Road, Zhoushan, China.
Man SongNational Engineering Research Center for Marine Aquaculture, Zhejiang Ocean University, No. 1 Haida South Road, Zhoushan, China.
Yunwang ShenNational Engineering Research Center for Marine Aquaculture, Zhejiang Ocean University, No. 1 Haida South Road, Zhoushan, China.
Zhongqi GuShengsi Marine Science and Technology Institute, Zhoushan, China.
Xinwei XiongNational Engineering Research Center for Marine Aquaculture, Zhejiang Ocean University, No. 1 Haida South Road, Zhoushan, China.
Mindong ZhouShengsi Marine Science and Technology Institute, Zhoushan, China.
Xiaojun YanNational Engineering Research Center for Marine Aquaculture, Zhejiang Ocean University, No. 1 Haida South Road, Zhoushan, China.
Xiao LiuNational Engineering Research Center for Marine Aquaculture, Zhejiang Ocean University, No. 1 Haida South Road, Zhoushan, China. liuxiao@zjou.edu.cn.

Funding

China Postdoctoral Science Foundation 2023M741837Key Laboratory of Mariculture of Ministry of Education, Ocean University of China KLM202203National Natural Science Foundation of China 32301408Special Grant of Zhoushan for Breeding Aquatic Animals 2024Y001-2
6 · The paper itself

Abstract

backgroundMussels are naturally distributed throughout ocean and freshwater ecosystems, with each species exhibiting distinct adaptive characteristics to dynamic environments. Aquaporins (AQPs) are essential selective transmembrane transport proteins that facilitate the permeation of water and other small solutes. These proteins play a significant role in maintaining metabolic homeostasis and supporting environmental adaptation via independent duplication and subsequent diversification. This study employs a comprehensive phylogenomic approach to uncover the original evolution and subsequent divergence of AQPs within the order Mytilida, a group that encompasses numerous mussel species.

resultsUtilizing genome-wide data from multiple organisms across different genera, our analysis revealed ancient foundational duplications that occurred in the last common ancestor of mussels and abundant subsequent lineage-specific expansions and diversifications following the divergence of different genera. Intriguingly, independent duplications of c-AQP orthologs primarily occurred in genera other than Mytilus. As a form of compensation, diversifications of the AQGP and AQP8 orthologs mainly occurred within the genus Mytilus. By integrating structural modeling, we provide insights into how the diversified amino acid compositions in the selective filters influence the inner-surface properties of the channel among duplicated paralogs. Moreover, comparative genomic analyses highlighted the role of presence/absence variations (PAVs) in promoting the further diversification of the AQP8 subfamily, presenting as adaptive genetic signatures among geographical distinct populations.

conclusionsThese findings underscore the importance of ancestral gene duplication, subsequent functional diversification, and large-scale genomic variation in shaping the evolutionary success and ecological adaptability of mussel AQPs, particularly within the Mytilus genus.

Indexed as

Adaptation, PhysiologicalAquaporinsBivalviaAnimalsEvolution, MolecularGene DuplicationPhylogenyAquaporinsAdaptationAquaporinDifferentiationDuplicationMussels

Identifiers

PMID41327001
PMCPMC12771848

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