Evidence map›Paper›PMID 41326588›Full record

ArticleScientific reports2025

Discovery and characterization of an enantioselective family VIII esterase from effluent treatment plant sludge metagenome.

Manish Kumar Yadav, Ravi Ranjan, Pratima Verma, Rakesh Sharma

Abstract read
In one paragraph

Article in Scientific reports, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Metal-Dependent Effects and Crowding Robustness of Pseudomonas fluorescens Esterase I.Chembiochem : a European journal of chemical biology · 2026
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Manish Kumar YadavGenomics and Genome Biology, CSIR-Institute of Genomics and Integrative Biology, Council of Scientific and Industrial Research, Mathura Road, New Delhi, 110025, India.
Ravi RanjanGenomics and Genome Biology, CSIR-Institute of Genomics and Integrative Biology, Council of Scientific and Industrial Research, Mathura Road, New Delhi, 110025, India.
Pratima VermaGenomics and Genome Biology, CSIR-Institute of Genomics and Integrative Biology, Council of Scientific and Industrial Research, Mathura Road, New Delhi, 110025, India.
Rakesh SharmaGenomics and Genome Biology, CSIR-Institute of Genomics and Integrative Biology, Council of Scientific and Industrial Research, Mathura Road, New Delhi, 110025, India. rakesh.igib@csir.res.in.

Funding

Council of Scientific and Industrial Research (CSIR), India BSC0124
6 · The paper itself

Abstract

This study reports on the biochemical characterization of a novel esterase (EstN3) belonging to class C β-lactamases of family VIII esterases from the functional screening of an Effluent Treatment Plant (ETP) sludge metagenome library. The enzyme is 410 amino acids long and does not contain a signal peptide. It showed maximum amino acid sequence similarity with uncharacterized serine hydrolases from Phenylobacterium and Caulobacter species, suggesting that it is a member of family VIII esterase. EstN3’s primary structure contains SxxKs, YSx, KTG, PLGMxDTxF, LxxxPGxxW, and GGxG motifs observed in class C β-lactamases, peptidases, and carboxylesterases of family VIII. This supports its designation as a class C β-lactamase. EstN3 favored shorter-chain p-nitrophenyl esters (C2-C6) based on substrate specificity profiling with p-nitrophenyl esters (C2-18). EstN3 exhibited excellent stereoselectivity in the production of S-mandelic acid under aqueous hydrolytic conditions. We have discovered that EstN3, a family VIII esterase, shows enantioselectivity towards methyl mandelate. The novel esterase was identified from the ETP sludge, indicating that unexplored environments serve as rich reservoirs for the discovery of novel enzymes with unique properties, offering valuable opportunities for advancing biocatalysis and industrial biotechnology.

Indexed as

EsterasesMetagenomeSewageAmino Acid Sequencebeta-LactamasesStereoisomerismSubstrate Specificitybeta-LactamasesEsterasesSewageBiocatalysis.Enantioselective esteraseFamily VIII esteraseIndustrial effluent treatment plant sludge metagenome libraryS-mandelic acid

Identifiers

PMID41326588
PMCPMC12770603

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.