Evidence map›Paper›PMID 41324557›Full record

ArticleBioinformatics (Oxford, England)2026

Pv3Rs: Plasmodium vivax relapse, recrudescence, and reinfection statistical genetic inference.

Yong See Foo, Michael T White, Aimee R Taylor

Abstract read
In one paragraph

Article in Bioinformatics (Oxford, England), 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. UnderstandingiScience · 2026
    Article
  2. Frequent and genetically diverseResearch square · 2026
    Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Yong See FooSchool of Mathematics and Statistics, University of Melbourne, Parkville, VIC 3010, Australia.ORCID 0000-0003-3010-9106
Michael T WhiteDepartment of Global Health, Institut Pasteur, Université Paris Cité, Paris 75015, France.ORCID 0000-0002-7472-4138
Aimee R TaylorDepartment of Global Health, Institut Pasteur, Université Paris Cité, Paris 75015, France.

Funding

Bill & Melinda Gates Foundation 101110393Gates Foundation INV-024368
6 · The paper itself

Abstract

summaryA Plasmodium vivax recurrence can be caused by activation of dormant liver-stage hypnozoites (relapse), failure to successfully treat a blood-stage infection (recrudescence), or a new mosquito inoculation (reinfection) (Pv3Rs). Inference of the cause of recurrence is important, especially in clinical trials, where molecular correction is used to improve estimates of antimalarial treatment efficacy. Pv3Rs implements statistical inference of P. vivax recurrence states (recrudescence, relapse, reinfection) from P. vivax genetic data. Under various simplifying assumptions, we model genetic relationships between parasites within and across infections to compute the posterior probabilities of recurrence states. Pv3Rs is applicable to a variety of genetic data types, including length polymorphic loci and amplicon sequencing data. AVAILABILITY AND IMPLEMENTATION: Pv3Rs is freely available on CRAN under the GNU license. Its CRAN DOI is 10.32614/CRAN.package.Pv3Rs. Source code and installation instructions can be found at https://cran.r-project.org/web/packages/Pv3Rs/index.html.

Indexed as

Malaria, VivaxPlasmodium vivaxReinfectionSoftwareAnimalsHumansRecurrence

Identifiers

PMID41324557
PMCPMC12758599

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.