Evidence map›Paper›PMID 41323700›Full record

ArticleRSC advances2025

Accelerated aptamer selection

Thuy-Duong Thi Tran, Hai Ly Nguyen, Phan Thi Ngoc Hoa, Thu Thao Pham, Nguyen Thi Thanh Huyen, Giang Dau Huong, Hoa Thi Hoang, Patrick Wagner, Anne Charrier, Truong T N Lien and 2 more

Abstract read
In one paragraph

Article in RSC advances, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Review
  3. Review
  4. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Thuy-Duong Thi TranVietnam-Korea Institute of Science and Technology Hoa Lac High-Teck Park, Thach That Hanoi Vietnam ttnlien@mst.gov.vn.
Hai Ly NguyenInstitute of Theoretical and Applied Research, Duy Tan University Hanoi 100000 Vietnam.
Phan Thi Ngoc HoaVietnam-Korea Institute of Science and Technology Hoa Lac High-Teck Park, Thach That Hanoi Vietnam ttnlien@mst.gov.vn.ORCID https://orcid.org/0009-0003-0744-0930
Thu Thao PhamGraduate University of Science and Technology, Vietnam Academy of Science and Technology Hanoi 100000 Vietnam.
Nguyen Thi Thanh HuyenVietnam-Korea Institute of Science and Technology Hoa Lac High-Teck Park, Thach That Hanoi Vietnam ttnlien@mst.gov.vn.
Giang Dau HuongVietnam-Korea Institute of Science and Technology Hoa Lac High-Teck Park, Thach That Hanoi Vietnam ttnlien@mst.gov.vn.
Hoa Thi HoangVietnam-Korea Institute of Science and Technology Hoa Lac High-Teck Park, Thach That Hanoi Vietnam ttnlien@mst.gov.vn.
Patrick WagnerLaboratory for Soft Matter and Biophysics, ZMB, Department of Physics and Astronomy KU Leuven, Celestijnenlaan 200 D B-3001 Leuven Belgium.
Anne CharrierAix Marseille Univ, CNRS, CINaM Marseille France.
Truong T N LienVietnam-Korea Institute of Science and Technology Hoa Lac High-Teck Park, Thach That Hanoi Vietnam ttnlien@mst.gov.vn.ORCID https://orcid.org/0000-0003-2440-2576
Phuong H NguyenUniversité Paris Cité, CNRS, Laboratoire de Biochime Théorique 13 Rue Pierre et Marie Curie Paris F-75005 Frances.
Nguyen The ToanKey Laboratory for Multiscale Simulation of Complex Systems and Faculty of Physics, University of Science, Vietnam National University Hanoi Vietnam.ORCID https://orcid.org/0000-0002-6331-2453

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Lipopolysaccharides (LPS), the major components of Gram-negative bacterial outer membranes, are critical virulence factors that can trigger severe immune responses, leading to sepsis and other inflammatory diseases. Rapid and accurate LPS detection is therefore essential in clinical diagnosis, pharmaceutical safety, and food monitoring. Aptamers represent a promising alternative to antibodies due to their high specificity, stability, and cost-effectiveness. However, the conventional SELEX process for aptamer selection is labor-intensive and time-consuming, often generating numerous candidates requiring costly experimental validation. Herein, we present a computationally assisted post-SELEX refinement pipeline that integrates molecular docking and molecular dynamics simulations to efficiently prioritize and validate aptamer candidates obtained from SELEX. Using LPS from

Identifiers

PMID41323700
PMCPMC12658737

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.