Evidence map›Paper›PMID 41318713›Full record

ArticleNature communications2025

Anatomy-to-tract mapping infers white matter pathways without diffusion streamline propagation.

Yee-Fan Tan, Khoi Minh Huynh, Siyuan Liu, Raphaël C-W Phan, Chee-Ming Ting, Pew-Thian Yap

Abstract read
In one paragraph

Article in Nature communications, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Review
  2. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

6 authors.

Yee-Fan Tan *Department of Radiology, University of North Carolina at Chapel Hill, Chapel Hill, NC, USA.ORCID 0000-0003-4187-1374
Khoi Minh Huynh *Department of Radiology, University of North Carolina at Chapel Hill, Chapel Hill, NC, USA.ORCID 0000-0001-9538-2408
Siyuan LiuMarine Engineering College, Dalian Maritime University, Dalian, China.ORCID 0000-0002-0946-4683
Raphaël C-W PhanSchool of Information Technology, Monash University, Subang Jaya, Malaysia.
Chee-Ming TingSchool of Information Technology, Monash University, Subang Jaya, Malaysia.
Pew-Thian YapDepartment of Radiology, University of North Carolina at Chapel Hill, Chapel Hill, NC, USA. ptyap@med.unc.edu.ORCID 0000-0003-1489-2102

Funding

Longitudinal Mapping of Human Brain Development in the First Years of LifeR01EB008374 · NIBIB · UNIV OF NORTH CAROLINA CHAPEL HILL · PI YAP, PEW-THIAN · 2009 to 2024
$5.1M
Computational Diffusion MRI for Studying Early Human Brain DevelopmentR01MH125479 · NIMH · UNIV OF NORTH CAROLINA CHAPEL HILL · PI YAP, PEW-THIAN · 2021 to 2025
$2.1M
Comprehensive MR Fingerprinting for Infants and Young Children at Risk for Developmental Delays.R01HD112923 · NICHD · DUKE UNIVERSITY · PI Dan Ma, DEANNE E WILSON-COSTELLO · 2024 to 2026
$1.7M
Multifaceted Characterization of Early Human Brain DevelopmentR01MH133836 · NIMH · UNIV OF NORTH CAROLINA CHAPEL HILL · PI YAP, PEW-THIAN · 2024 to 2025
$1.2M
AI-Powered MRI Quality Control and Artifact Correction for Multi-Site StudiesR01EB035160 · NIBIB · UNIV OF NORTH CAROLINA CHAPEL HILL · PI Pew-Thian Yap · 2024 to 2026
$1.2M
NIBIB NIH HHS R01 EB008374NIBIB NIH HHS R01 EB035160NICHD NIH HHS R01 HD112923NIMH NIH HHS R01 MH125479NIMH NIH HHS R01 MH133836U.S. Department of Health & Human Services | NIH | National Institute of Biomedical Imaging and Bioengineering (NIBIB) R01EB008374U.S. Department of Health & Human Services | NIH | National Institute of Biomedical Imaging and Bioengineering (NIBIB) R01EB035160U.S. Department of Health & Human Services | NIH | National Institute of Mental Health (NIMH) R01MH125479U.S. Department of Health & Human Services | NIH | National Institute of Mental Health (NIMH) R01MH133836
6 · The paper itself

Abstract

Diffusion tractography, a cornerstone of white matter mapping, relies on point-to-point streamline propagation, a process often limited by the signal-to-noise ratio and spatioangular resolution of diffusion MRI (dMRI). Here, we present Anatomy-to-Tract Mapping (ATM), a framework that generates bundle-specific streamlines directly from T1-weighted MRI without requiring orientation field estimation, voxelwise segmentation, or streamline propagation. ATM leverages the high quality and minimal distortion of anatomical MRI and learns from paired T1w and tractogram data to synthesize anatomically plausible, subject-specific streamlines. This anatomy-driven approach addresses complex configurations such as crossing, kissing, and bending fibers, providing robust bundle reconstructions. Using the TractoInferno dataset with 30 white matter bundles, we evaluate ATM against diffusion-based methods, including MRtrix probabilistic tracking with BundleSeg and SCIL atlas warping. ATM demonstrates strong performance across multiple metrics, including bundle similarity, volume coverage, angular correlation, and geometric fidelity.

Indexed as

BrainBrain MappingDiffusion Tensor ImagingWhite MatterAdultAlgorithmsDiffusion Magnetic Resonance ImagingFemaleHumansImage Processing, Computer-AssistedMale

Identifiers

PMID41318713
PMCPMC12764483

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.