Evidence map›Paper›PMID 41317199›Full record

ArticleMarine biotechnology (New York, N.Y.)2025

Transcriptome Analysis Revealed the Copper Ion Uptake by Oocystis borgei from Offshore Polluted Water.

Junyu Tang, Qizhao Liang, Rui Zhang, Xiaoping Huang

Abstract read
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In one paragraph

Article in Marine biotechnology (New York, N.Y.), 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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0cells of the map it votes in
0citing papers in PubMed
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1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Junyu TangCollege of Food Science, Guangdong Ocean University, Zhanjiang, Guangdong, 524088, China.
Qizhao LiangCollege of Food Science, Guangdong Ocean University, Zhanjiang, Guangdong, 524088, China.
Rui ZhangCollege of Food Science, Guangdong Ocean University, Zhanjiang, Guangdong, 524088, China. zhangrui168@gdou.edu.cn.
Xiaoping HuangSchool of Chemical Engineering, Huaqiao University, Xiamen, Fujian, 361021, China.

Funding

Future Industrial Development Fund of Shenzhen JCYJ20170413111950426
6 · The paper itself

Abstract

Copper ion pollution poses a significant threat to marine ecosystems. Seaweeds exhibit potential for metal bioremediation through their inherent mechanisms of metal absorption and tolerance. However, the understanding of seaweed resistance to metal ions, particularly copper, continues to evolve, despite previous studies elucidating some underlying molecular mechanisms. This study delineates the transcriptomic adaptations of Oocystis borgei to copper exposure via RNA-seq, highlighting its remarkable bioremoval efficacy, consistently averages 82%. RNA sequencing revealed profound alterations in transcriptomic profiles, which were further examined through Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathways analyses. This comprehensive examination identified key mechanisms facilitating copper absorption and enhanced tolerance in Oocystis borgei, including transporter activity, oxidation-reduction processes, photosynthesis, and glutathione metabolism. Overall, this analysis provides essential insights into the molecular mechanisms driving seaweed adaptive responses to copper-induced stress, laying the groundwork for future studies on their bioremediative capabilities.

Indexed as

CopperTranscriptomeWater Pollutants, ChemicalBiodegradation, EnvironmentalGene Expression ProfilingPhotosynthesisSeaweedCopperWater Pollutants, ChemicalCopper ionsGenesOocystis borgeiPathwayTranscriptome

Identifiers

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.