Evidence map›Paper›PMID 41316075›Full record

ArticleBMC cancer2025

Optimal qMSP cutoff value for MGMT promoter methylation in glioblastoma and its validation for clinical significance.

Zeynep Huseyinoglu, Ece Uysal, Mehmet Arda Inan, Turna Demirci, Guzin Gokay, Fuat Kaan Aras, Sibel Erdamar, Koray Ozduman, M Necmettin Pamir, Ayca Ersen Danyeli

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In one paragraph

Article in BMC cancer, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

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1 · What the graph read from it

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2 · The registry

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3 · Its place in the literature

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1 citing paper in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

10 authors.

Zeynep HuseyinogluDepartment of Neurosurgery, Acıbadem University School of Medicine, Istanbul, Turkey.
Ece UysalDepartment of Neurosurgery, Acıbadem Altunizade Hospital, Istanbul, Turkey.
Mehmet Arda InanDepartment of Pathology, Acıbadem University School of Medicine, Istanbul, Turkey.
Turna DemirciAcıbadem Health Group, Molecular Pathology Laboratory, Istanbul, Turkey.
Guzin Gokayİstanbul Medeniyet Üniversitesi Lisansüstü Eğitim Enstitüsü, İstanbul, Turkey.
Fuat Kaan ArasDepartment of Neuropathology, Heidelberg University, Heidelberg, Germany.
Sibel ErdamarDepartment of Pathology, Acıbadem University School of Medicine, Istanbul, Turkey.
Koray OzdumanDepartment of Neurosurgery, Acıbadem University School of Medicine, Istanbul, Turkey.
M Necmettin PamirDepartment of Neurosurgery, Acıbadem Altunizade Hospital, Istanbul, Turkey.
Ayca Ersen DanyeliDepartment of Pathology, Acıbadem University School of Medicine, Istanbul, Turkey. aycaersen@gmail.com.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundGlioblastoma (GBM) is the most common and aggressive primary brain tumor, with limited survival despite multimodal treatment strategies. O6-Methylguanine-DNA Methyltransferase (MGMT) promoter methylation is a well-established predictive biomarker for response to temozolomide (TMZ) therapy. However, determining an optimal quantitative methylation-specific PCR (qMSP) cut-off value remains a challenge in clinical practice.

objectiveThis study aimed to establish an optimal qMSP cut-off value for MGMT promoter methylation and validate its prognostic significance in GBM patients. The impact of MGMT methylation status on survival outcomes was analyzed concerning surgical extent, tumor localization, and white matter tract involvement.

methodsA retrospective analysis of 101 GBM patients (IDH-wildtype) diagnosed between 2008 and 2022 was performed. All patients underwent surgical resection (total/partial excision or stereotactic biopsy) followed by standard chemoradiotherapy. MGMT promoter methylation status was assessed using real-time qMSP. The optimal cut-off value was determined via receiver operating characteristic curve analysis. Kaplan-Meier survival analysis and Cox regression models evaluated the association between MGMT methylation levels, clinical characteristics, and overall survival (OS).

resultsAmong 101 patients with IDH-wildtype glioblastoma, a qMSP cut-off value of 0.242% demonstrated strong diagnostic performance for MGMT methylation status (AUC = 0.875), with 78% sensitivity and 86% specificity. Patients with high methylation levels (≥ 0.242%) showed significantly longer median overall survival compared to those with low methylation (24 vs. 12 months; p = 0.006). This prognostic relevance persisted across surgical and anatomical subgroups. Multivariable Cox regression identified high qMSP methylation (HR ≈ 0.45, p < 0.001) and extent of resection ≥ 90% (HR ≈ 0.30, p = 0.002) as independent predictors of improved survival, whereas TERT promoter mutation (HR ≈ 1.9, p = 0.017) was associated with worse survival. Stratified analysis revealed that TERTp-mutant tumors with low methylation had the worst outcomes. Additionally, excisional surgery and neocortical tumor involvement were associated with significantly better survival (p = 0.0010 and p = 0.0218, respectively). These findings validate within our institutional setting the clinical utility of the 0.242% qMSP threshold for prognostic stratification in glioblastoma, although external multicenter validation is warranted before generalization to routine clinical practice.

conclusionThe identified qMSP cut-off value (0.242) based on the procedure described in this study provides a robust prognostic stratification tool for GBM patients. High MGMT methylation correlates with improved survival, supporting its integration into clinical decision-making. Further multi-center validation studies are warranted to establish standardized MGMT assessment methodologies.

Indexed as

Brain NeoplasmsDNA MethylationDNA Modification MethylasesDNA Repair EnzymesGlioblastomaPromoter Regions, GeneticTumor Suppressor ProteinsAdultAgedBiomarkers, TumorClinical RelevanceFemaleHumansKaplan-Meier EstimateMaleMiddle AgedBiomarkers, TumorDNA Modification MethylasesDNA Repair EnzymesMGMT protein, humanTemozolomideTumor Suppressor ProteinsGlioblastomaMGMT promoter methylationOverall survivalPrognostic biomarkerQuantitative methylation-specific PCR (qMSP)Temozolomide

Identifiers

PMID41316075
PMCPMC12664229

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.