Evidence map›Paper›PMID 41315814›Full record

ArticleNature methods2026

ExoSloNano: multimodal nanogold labels for identification of macromolecules in live cells and cryo-electron tomograms.

Lindsey N Young, Alice Sherrard, Huabin Zhou, Farhaz Shaikh, Joshua Hutchings, Margot Riggi, Mythreyi Narasimhan, W Alexander Flaherty, Eric J Bennett, Michael K Rosen and 2 more

Abstract read
In one paragraph

Article in Nature methods, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Review
  2. Cryogenic electron tomography by the numbers: Charting underexplored lineages in structural cell biology.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  3. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

12 authors.

Lindsey N Young *School of Biological Sciences, University of California, San Diego, La Jolla, CA, USA.ORCID http://orcid.org/0000-0003-3494-8302
Alice Sherrard *Yale University, New Haven, CT, USA.
Huabin ZhouUniversity of Texas Southwestern Medical Center, Dallas, TX, USA.
Farhaz ShaikhSchool of Biological Sciences, University of California, San Diego, La Jolla, CA, USA.
Joshua HutchingsSchool of Biological Sciences, University of California, San Diego, La Jolla, CA, USA.
Margot RiggiMax Planck Institute for Biochemistry, Munich, Germany.ORCID http://orcid.org/0000-0002-8930-5331
Mythreyi NarasimhanSchool of Biological Sciences, University of California, San Diego, La Jolla, CA, USA.
W Alexander FlahertySchool of Biological Sciences, University of California, San Diego, La Jolla, CA, USA.
Eric J BennettSchool of Biological Sciences, University of California, San Diego, La Jolla, CA, USA.ORCID http://orcid.org/0000-0002-1201-3314
Michael K RosenUniversity of Texas Southwestern Medical Center, Dallas, TX, USA.ORCID http://orcid.org/0000-0002-0775-7917
Antonio J GiraldezYale University, New Haven, CT, USA. antonio.giraldez@yale.edu.ORCID http://orcid.org/0000-0002-6823-137X
Elizabeth VillaSchool of Biological Sciences, University of California, San Diego, La Jolla, CA, USA. evilla@ucsd.edu.ORCID http://orcid.org/0000-0003-4677-9809

Funding

CHEETAH Center for the Structural Biology of HIV Infection, Restriction, and Viral DynamicsU54AI170856 · NIAID · UTAH STATE HIGHER EDUCATION SYSTEM--UNIVERSITY OF UTAH · PI Owen Pornillos · 2022 to 2026
$34.4M
Molecular mechanisms of the maternal to zygotic transitionR35GM122580 · NIGMS · YALE UNIVERSITY · PI Antonio J Giraldez · 2017 to 2026
$8.1M
ChimeraX -- Next Generation Visualization and Analysis Software for Multiscale ModelingR01GM129325 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI FERRIN, THOMAS E · 2018 to 2025
$5.2M
Multimodal Analysis of the Genome Architecture Using Expansion MicroscopyR01HG012969 · NHGRI · YALE UNIVERSITY · PI Joerg Bewersdorf, Antonio J Giraldez · 2024 to 2026
$2.1M
Leveraging ubiquitin-dependent regulatory mechanisms to improve proteome quality in health and diseaseR35GM148339 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI Eric J Bennett · 2023 to 2026
$2.1M
Cell Organization Through Phase Separation: Mechanisms, Functions and DiseaseR35GM141736 · NIGMS · UT SOUTHWESTERN MEDICAL CENTER · PI ROSEN, MICHAEL K · 2021 to 2025
$1.8M
Class III PI3K as an Autophagy Reactivation Switch in Malignant TransformationK00CA223029 · NCI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI YOUNG, LINDSEY N · 2019 to 2022
$295k
Investigating the role of nuclear mechanics in the regulation of chromatin structure and embryonic cell fateK99HD112607 · NICHD · YALE UNIVERSITY · PI SHERRARD, ALICE LOUISA · 2023 to 2024
$249k
European Molecular Biology Organization (EMBO) ALTF #902-2019Howard Hughes Medical Institute (HHMI) N/ANational Science Foundation (NSF) DBI 1920374NCI NIH HHS K00 CA223029NHGRI NIH HHS R01 HG012969NIAID NIH HHS U54 AI170856NICHD NIH HHS K99 HD112607NIGMS NIH HHS R01 GM129325NIGMS NIH HHS R35 GM122580NIGMS NIH HHS R35 GM141736NIGMS NIH HHS R35 GM148339Pew Charitable Trusts N/AU.S. Department of Health & Human Services | NIH | Eunice Kennedy Shriver National Institute of Child Health and Human Development (NICHD) K99 HD112607-02U.S. Department of Health & Human Services | NIH | National Institute of General Medical Sciences (NIGMS) R35-GM141736U.S. Department of Health & Human Services | NIH | National Institute of General Medical Sciences (NIGMS) R35GM148339
6 · The paper itself

Abstract

In situ cryo-electron microscopy (cryo-EM) enables the direct interrogation of structure-function relationships by resolving macromolecular structures in their native cellular environment. Recent progress in sample preparation, imaging and data processing has enabled the identification and determination of large biomolecular complexes. However, the majority of proteins are of a size that still eludes identification in cellular cryo-EM data, and most proteins exist in low copy numbers. Therefore, novel tools are needed for cryo-EM to identify macromolecules across multiple size scales (from microns to nanometers). Here we introduce nanogold probes for detecting specific proteins using correlative light and electron microscopy, cryo-electron tomography (cryo-ET) and resin-embedded electron microscopy. These nanogold probes can be introduced into live cells, in a manner that preserves intact molecular networks and cell viability. We use this ExoSloNano system to identify both cytoplasmic and nuclear proteins by room-temperature electron microscopy, and resolve associated structures by cryo-ET. By providing high-efficiency protein labeling in live cells and molecular specificity within cryo-ET tomograms, ExoSloNano expands the proteome available to electron microscopy.

Indexed as

Cryoelectron MicroscopyElectron Microscope TomographyGoldMacromolecular SubstancesMetal NanoparticlesHumansGoldMacromolecular Substances

Identifiers

PMID41315814
PMCPMC12791015

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.