Evidence map›Paper›PMID 41315265›Full record

ArticleNature communications2025

Maternal histone methyltransferases antagonistically regulate autosomal random monoallelic expression (aRMAE) in C. elegans.

Bryan Sands, Soo R Yun, Junko Oshima, Alexander R Mendenhall

Abstract read
In one paragraph

Article in Nature communications, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

4 authors.

Bryan SandsDepartment of Laboratory Medicine and Pathology, School of Medicine, University of Washington, Seattle, WA, USA.
Soo R YunDepartment of Laboratory Medicine and Pathology, School of Medicine, University of Washington, Seattle, WA, USA.
Junko OshimaDepartment of Laboratory Medicine and Pathology, School of Medicine, University of Washington, Seattle, WA, USA.
Alexander R MendenhallDepartment of Laboratory Medicine and Pathology, School of Medicine, University of Washington, Seattle, WA, USA. alexworm@uw.edu.ORCID 0000-0002-4716-7671

Funding

XENOBIOTIC BIOTRANSFORMATION AND DISPOSITIONP30ES007033 · NIEHS · UNIVERSITY OF WASHINGTON · PI Nicole Ann Errett · 1995 to 2026
$42.5M
University of Washington Nathan Shock Center of Excellence in the Basic Biology of AgingP30AG013280 · NIA · UNIVERSITY OF WASHINGTON · PI Maitreya J Dunham · 1995 to 2026
$27.1M
Migrating the National Long Term Care Survey to the MedRIC Health and Aging Data EnclaveR01AG063971 · NIA · DUKE UNIVERSITY · PI STALLARD, P.J. ERIC · 2020 to 2024
$4.1M
International Registry of Werner SyndromeR01CA210916 · NCI · UNIVERSITY OF WASHINGTON · PI JUNKO OSHIMA · 2016 to 2026
$3.8M
Understanding the antagonistic role of proteostasis in Alzheimer disease and cancer.R01CA219460 · NCI · UNIVERSITY OF WASHINGTON · PI MENDENHALL, ALEXANDER RICHARD · 2018 to 2022
$2.2M
NCI NIH HHS R01 CA210916NCI NIH HHS R01 CA219460NIA NIH HHS P30 AG013280NIA NIH HHS R01 AG063971NIEHS NIH HHS P30 ES007033U.S. Department of Health & Human Services | NIH | National Cancer Institute (NCI) R01CA210916U.S. Department of Health & Human Services | NIH | National Cancer Institute (NCI) R01CA219460U.S. Department of Health & Human Services | NIH | National Institute of Environmental Health Sciences (NIEHS) P30ES007033U.S. Department of Health & Human Services | NIH | National Institute on Aging (U.S. National Institute on Aging) P30AG013280U.S. Department of Health & Human Services | NIH | National Institute on Aging (U.S. National Institute on Aging) R01AG063971
6 · The paper itself

Abstract

Undefined epigenetic programs act to probabilistically silence individual autosomal alleles, generating unique individuals, even from genetic clones. This random monoallelic expression can explain variation in traits and diseases that differences in genes and environments cannot. Here, we developed the nematode Caenorhabditis elegans to study monoallelic expression in whole tissues, and defined a developmental genetic regulation pathway. We found maternal H3K9 histone methyltransferase (HMT) SET-25/SUV39/G9a works with HPL-2/HP1 and LIN-61/L3MBTL2 to randomly silence alleles in the intestinal progenitor E-cell of 8-cell embryos to cause monoallelic expression. SET-25 was antagonized by another maternal H3K9 HMT, MET-2/SETDB1, which works with LIN-65/ATF7IP and ARLE-14/ARL14EP to prevent monoallelic expression. The HMT catalytic SET domains of both MET-2 and SET-25 were required for regulating monoallelic expression. Our data support a model wherein SET-25 and MET-2 regulate histones during development to generate patterns of somatic monoallelic expression that are persistent but not heritable.

Indexed as

Caenorhabditis elegansCaenorhabditis elegans ProteinsGene Expression Regulation, DevelopmentalHistone-Lysine N-MethyltransferaseAllelesAnimalsChromosomal Proteins, Non-HistoneEpigenesis, GeneticFemaleHistonesNuclear ProteinsCaenorhabditis elegans ProteinsChromosomal Proteins, Non-HistoneHistone-Lysine N-MethyltransferaseHistonesHPL-2 protein, C elegansMet-2 protein, C elegansNuclear ProteinsSET-25 protein, C elegansSET-2 protein, C elegans

Identifiers

PMID41315265
PMCPMC12753696

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.