Evidence map›Paper›PMID 41314177›Full record

ArticlemSphere2025

Transcriptional and metabolic modeling analyses of developing

Charles Puerner, Kaesi A Morelli, Joshua D Kerkaert, Jane T Jones, Katherine G Quinn, Nathan DeMichaelis, Sandeep Vellanki, Chen Liao, Robert A Cramer

Abstract read
In one paragraph

Article in mSphere, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Review
  2. Article
  3. Antibiofilm activity of terbinafine, itraconazole and their combination against Sporothrix brasiliensis yeast-like form's biofilms.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2026
    Article
  4. Pathogenesis and Triazole Resistance inInfection and drug resistance · 2026
    Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

9 authors.

Charles Puerner *Department of Microbiology and Immunology, Geisel School of Medicine, Dartmouth, Hanover, New Hampshire, USA.ORCID 0000-0002-4402-0295
Kaesi A Morelli *Department of Microbiology and Immunology, Geisel School of Medicine, Dartmouth, Hanover, New Hampshire, USA.ORCID 0000-0002-9637-030X
Joshua D Kerkaert *Department of Microbiology and Immunology, Geisel School of Medicine, Dartmouth, Hanover, New Hampshire, USA.ORCID 0000-0001-6869-7404
Jane T JonesDepartment of Microbiology and Immunology, Geisel School of Medicine, Dartmouth, Hanover, New Hampshire, USA.
Katherine G QuinnDepartment of Microbiology and Immunology, Geisel School of Medicine, Dartmouth, Hanover, New Hampshire, USA.
Nathan DeMichaelisDepartment of Microbiology and Immunology, Geisel School of Medicine, Dartmouth, Hanover, New Hampshire, USA.
Sandeep VellankiDepartment of Microbiology and Immunology, Geisel School of Medicine, Dartmouth, Hanover, New Hampshire, USA.
Chen LiaoDepartment of Microbiology and Immunology, Geisel School of Medicine, Dartmouth, Hanover, New Hampshire, USA.
Robert A CramerDepartment of Microbiology and Immunology, Geisel School of Medicine, Dartmouth, Hanover, New Hampshire, USA.ORCID 0000-0001-5503-5006

Funding

Understanding the role of RNA-binding protein mutations in cancerP20GM113132 · NIGMS · DARTMOUTH COLLEGE · PI MIERKE, DALE F · 2016 to 2025
$25.9M
Translational Research CoreP30DK117469 · NIDDK · DARTMOUTH COLLEGE · PI DEBORAH A HOGAN · 2018 to 2026
$13.9M
HOST-MICROBE INTERACTIONST32AI007519 · NIAID · DARTMOUTH COLLEGE · PI DEBORAH A HOGAN · 1997 to 2026
$5.9M
Evolution of Aspergillus fumigatus virulenceR01AI130128 · NIAID · DARTMOUTH COLLEGE · PI Robert Andrew Cramer · 2017 to 2026
$4.5M
Environmental Oxygen Transitions and Aspergillosis Disease ProgressionR01AI146121 · NIAID · DARTMOUTH COLLEGE · PI CRAMER, ROBERT ANDREW · 2019 to 2023
$2.6M
Dartmouth Cystic Fibrosis Training ProgramT32HL134598 · NHLBI · DARTMOUTH COLLEGE · PI George A. O'Toole · 2017 to 2026
$1.7M
Unraveling the ecology of intestinal fungal expansion in immunocompromised patients through computational modeling and machine learningR00AI175599 · NIAID · DARTMOUTH COLLEGE · PI LIAO, CHEN · 2025 to 2025
$247k
Cystic Fibrosis Foundation STANTO19R0National Institute of Allergy and Infectious Diseases R00AI175599National Institute of Allergy and Infectious Diseases R01AI130128National Institute of Allergy and Infectious Diseases R01AI146121National Institute of Allergy and Infectious Diseases T32AI007519NHLBI NIH HHS T32 HL134598NHLBI NIH HHS T32HL134598NIAID NIH HHS R00 AI175599NIAID NIH HHS R01 AI130128NIAID NIH HHS R01 AI146121NIAID NIH HHS T32 AI007519NIDDK NIH HHS P30 DK117469NIDDK NIH HHS P30DK117469NIGMS NIH HHS P20 GM113132NIGMS NIH HHS P20GM113132
6 · The paper itself

Abstract

IMPORTANCE:

Indexed as

Aspergillus fumigatusBiofilmsMetabolic Networks and PathwaysEthanolFungal ProteinsGene Expression Regulation, FungalHyphaeEthanolFungal ProteinsAspergillus fumigatusbiofilmbiofilm maintenancefermentationhypoxiametabolic flux analysis

Identifiers

PMID41314177
PMCPMC12724364

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.