Evidence map›Paper›PMID 41309981›Full record

ArticleScientific reports2025

Vision language models versus machine learning models performance on polyp detection and classification in colonoscopy images.

Mohammad Amin Khalafi, Seyed Amir Ahmad Safavi-Naini, Ameneh Salehi, Nariman Naderi, Dorsa Alijanzadeh, Pardis Ketabi Moghadam, Kaveh Kavousi, Negar Golestani, Shabnam Shahrokh, Soltanali Fallah and 6 more

Abstract read
In one paragraph

Article in Scientific reports, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors.

Mohammad Amin Khalafi *Research Institute for Gastroenterology and Liver Diseases, Shahid Beheshti University of Medical Sciences, Tehran, Iran.
Seyed Amir Ahmad Safavi-Naini *Research Institute for Gastroenterology and Liver Diseases, Shahid Beheshti University of Medical Sciences, Tehran, Iran.
Ameneh SalehiResearch Institute for Gastroenterology and Liver Diseases, Shahid Beheshti University of Medical Sciences, Tehran, Iran.
Nariman NaderiResearch Institute for Gastroenterology and Liver Diseases, Shahid Beheshti University of Medical Sciences, Tehran, Iran.
Dorsa AlijanzadehResearch Institute for Gastroenterology and Liver Diseases, Shahid Beheshti University of Medical Sciences, Tehran, Iran.
Pardis Ketabi MoghadamResearch Institute for Gastroenterology and Liver Diseases, Shahid Beheshti University of Medical Sciences, Tehran, Iran.
Kaveh KavousiLaboratory of Complex Biological Systems and Bioinformatics (CBB), Department of Bioinformatics, Institute of Biochemistry and Biophysics (IBB), University of Tehran, Tehran, Iran.
Negar GolestaniDivision of Data-Driven and Digital Health (D3M), The Charles Bronfman Institute for Personalized Medicine, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Shabnam ShahrokhResearch Institute for Gastroenterology and Liver Diseases, Shahid Beheshti University of Medical Sciences, Tehran, Iran.
Soltanali FallahDepartment of GI Diseases, Tehran Milad Hospital, Tehran, Iran.
Jamil S SamaanKarsh Division of Gastroenterology and Hepatology, Cedars-Sinai Medical Center, Los Angeles, CA, USA.
Nicholas P TatonettiDepartment of Computational Biomedicine, Cedars-Sinai Medical Center, West Hollywood, CA, USA.
Nicholas HoerterHenry D. Janowitz Division of Gastroenterology, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Girish NadkarniDivision of Data-Driven and Digital Health (D3M), The Charles Bronfman Institute for Personalized Medicine, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Hamid Asadzadeh AghdaeiResearch Institute for Gastroenterology and Liver Diseases, Shahid Beheshti University of Medical Sciences, Tehran, Iran. hamid.assadzadeh@gmail.com.
Ali SoroushDivision of Data-Driven and Digital Health (D3M), The Charles Bronfman Institute for Personalized Medicine, Icahn School of Medicine at Mount Sinai, New York, NY, USA. Ali.Soroush@mountsinai.org.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Medical image analysis is central to clinical decision-making, and recent advances in vision–language models (VLMs) have introduced promising capabilities for jointly processing visual and textual data. This study evaluates zero-shot VLMs against convolutional neural networks (CNNs) and classical machine learning (CML) models for polyp detection (CADe) and classification (CADx) using 2,258 colonoscopy images from 428 patients with histopathological labels. We benchmarked 15 approaches including ResNet50, five CMLs (random forest, support vector machine, logistic regression, decision tree, Gaussian naive Bayes), two contrastive vision–language encoders (CLIP, BiomedCLIP), and seven frontier VLMs (GPT-4, GPT-4.1, GPT-4.1-mini, Gemma-3-27b, Qwen-2.5-vl-72b, Gemini-1.5-Pro, Claude-3-Opus). For polyp detection, the highest-performing VLMs (GPT-4.1 F1: 91.98%, GPT-4.1-mini F1: 91.16%) matched CNN performance (ResNet50 F1: 91.35%), though substantial variability existed across VLMs (F1 range: 19.37% to 91.98%). For classification, CNNs substantially outperformed VLMs: ResNet50 achieved weighted F1 of 74.94% versus 55.07% for GPT-4.1-mini, with performance gaps widening dramatically for rare polyp subtypes where VLMs often achieved 0% F1. External validation on 75 images showed that while ResNet50 performance declined substantially, some VLMs demonstrated more stable cross-institutional performance. These findings establish a task-dependent performance hierarchy where VLMs match CNNs for detection but remain limited for classification, suggesting distinct clinical roles for each approach.

Indexed as

Colonic PolypsColonoscopyImage Processing, Computer-AssistedMachine LearningClassification AlgorithmsConvolutional Neural NetworksHumansPredictive Learning ModelsRandom ForestColonoscopyComputer aided detectionComputer aided diagnosisGastroenterologyVision language models

Identifiers

PMID41309981
PMCPMC12749334

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.