Evidence map›Paper›PMID 41307823›Full record

ArticleGenes & genomics2026

Multiple machine learning algorithms construct cuproptosis genes and oxidative stress genes-related LncRNAs signature with prognostic and therapeutic relevance in ovarian cancer.

Ruyue Pan, Yan Yang, Qinghuo Kong, Xin Hu, Jie Yu, Jiaxu Chen

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Article in Genes & genomics, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

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1 citing paper in PubMed.

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5 · Who and what money

Authors and funding

6 authors.

Ruyue PanAffiliated Jiangmen TCM Hospital of Ji'nan University, Jiangmen, China.
Yan YangGuangdong Medical University, Dongguan, China.
Qinghuo KongAffiliated Jiangmen TCM Hospital of Ji'nan University, Jiangmen, China.
Xin HuDepartment of Laboratory Medicine, Zhongnan Hospital of Wuhan University, Wuhan, China.
Jie YuAffiliated Jiangmen TCM Hospital of Ji'nan University, Jiangmen, China. jie-soul@163.com.
Jiaxu ChenGuangzhou Key Laboratory of Formula-Pattern of Traditional Chinese Medicine, School of Traditional Chinese Medicine, Jinan University, Guangzhou, China. chenjiaxu@hotmail.com.

Funding

Administration of Traditional Chinese Medicine of Guangdong Province, China (No. 20222257Dongguan Science and Technology of Social Development Program No.20231800905232
6 · The paper itself

Abstract

backgroundCuproptosis and oxidative stress (COS) are emerging regulators in cancer biology. However, their link to long non-coding RNAs (lncRNAs) and clinical outcomes in ovarian cancer remains unclear.

objectiveThis study aimed to construct and validate a prognostic signature based on COS-related lncRNAs to improve risk stratification and provide insights into therapeutic strategies for ovarian cancer.

methodsRNA-seq and clinical data from TCGA and GEO were analyzed to identify COS-related lncRNAs via WGCNA and Pearson correlation. Prognostic lncRNAs were screened using Cox regression and modeled using multiple machine learning algorithms. Immune profiles, mutation patterns, drug sensitivity, and experimental validation were performed.

resultsA 12-lncRNA signature was established that stratified patients into high- and low-risk groups with significant survival differences (HR = 22.6145, p < 0.001). The model showed strong predictive performance (AUCs: 0.91/0.967/0.974) and was validated externally. High-risk patients exhibited greater mutation burden, altered immune pathways (interferon, TGF-β), and differential predicted sensitivity to agents like Axitinib and Pazopanib. RT-qPCR confirmed the expression patterns of 11 out of 12 lncRNAs.

conclusionThis study proposes a robust 12-lncRNA signature linking cuproptosis and oxidative stress with prognosis and therapy response in ovarian cancer, offering preliminary insights for personalized treatment guidance.

Indexed as

Machine LearningOvarian NeoplasmsOxidative StressRNA, Long NoncodingBiomarkers, TumorFemaleGene Expression Regulation, NeoplasticHumansPrognosisBiomarkers, TumorRNA, Long NoncodingCuproptosisImmune microenvironmentlncRNAOvarian cancerOxidative stressPrognostic biomarker

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.