ArticleJournal of molecular modeling2025
Modeling molecular environment of allomorphic N-salicylidene-4-halo-aniline crystals through iterative QM/QM' structural optimization.
Article in Journal of molecular modeling, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.
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Abstract
contextTwo allomorphic crystals, photochromic N-salicylidene-4-bromoaniline (α-SA4B) and non-photochromic N-salicylidene-4-chloroaniline (β-SA4C), were simulated using a hierarchical hybrid quantum mechanical (QM/QM') method. Despite the similar potential energy surface (PES) profiles observed in their isolated forms, distinct differences emerged in the cluster model simulations of α-SA4B and β-SA4C. This observation suggests that the molecular environment influenced the torsional energy landscape associated with their chromic properties.
methodEach crystal was represented by a cluster model consisting of a central molecule and 14 peripheral molecules arranged based on crystallographic symmetry. The central molecule was treated as the high-level QM layer, while the surrounding molecules were kept fixed as the low-level QM' layer. Following iterative optimization of the cluster model, the PES was calculated to track the cis-trans isomerization process of the central molecule. The iterative optimization was conducted with ONIOM (B3LYP/6-311G**: HF-D3BJ/6-31G*), and the PES was calculated with the same level. For each cluster model, the excited state was calculated with the TD-DFT method. All the quantum chemical calculations were performed using Gaussian 16 software.
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