Evidence map›Paper›PMID 41307664›Full record

ArticleNeuroradiology2026

Application of deep neural networks in automatized ventriculometry and segmentation of the aqueduct in pediatric hydrocephalus patients.

Fabienne Kühne, Kilian Rüther, Christopher Güttler, Juliane C Stöckel, Ulrich-Wilhelm Thomale, Anna Tietze, Andrea Dell'Orco

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Article in Neuroradiology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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2 · The registry

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4 · The record

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5 · Who and what money

Authors and funding

7 authors.

Fabienne KühneDepartment of Neonatology, Charité - University Medicine Berlin, Berlin, Germany. fabienne.kuehne@charite.de.ORCID http://orcid.org/0000-0002-1735-0125
Kilian RütherInstitute of Neuroradiology, Charité - University Medicine Berlin, Berlin, Germany.
Christopher GüttlerInstitute of Neuroradiology, Charité - University Medicine Berlin, Berlin, Germany.
Juliane C StöckelInstitute of Neuroradiology, Charité - University Medicine Berlin, Berlin, Germany.
Ulrich-Wilhelm ThomaleDepartment of Neurosurgery with Pediatric Neurosurgery, Charité - University Medicine Berlin, Berlin, Germany.
Anna Tietze *Institute of Neuroradiology, Charité - University Medicine Berlin, Berlin, Germany.
Andrea Dell'Orco *Institute of Neuroradiology, Charité - University Medicine Berlin, Berlin, Germany.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

purposeThis study validated VParNet and nnU-Net for ventricular segmentation in pediatric hydrocephalus, a condition characterized by irregular and asymmetric ventricular shapes.

methodsManual segmentation of 139 MRI scans (ages range 2.6-20.3 years) was performed for the four ventricles and the aqueduct. A five-fold cross-validation was conducted for both models. VParNet was tested with its original weights and after retraining on pediatric data. nnU-Net was extended to also segment the aqueduct. Performance was evaluated using the Dice Similarity Coefficient (DSC), Intraclass Correlation Coefficient (ICC), and Minimal Detectable Change (MDC).

resultsVParNet preprocessing failed in 20.9% of cases, requiring subject exclusion. Both models showed good to excellent segmentation accuracy and reliability (DSC: 0.87-0.95; ICC: 0.81-1.0). Retraining VParNet improved DSC scores. MDC values (0.05-3.0) indicated high sensitivity for the lateral and third ventricles and acceptable sensitivity for the fourth ventricle. Aqueduct segmentation remained challenging (nnU-Net: DSC = 0.68; ICC = 0.81; MDC = 0.04).

conclusionAll tested models performed well in pediatric hydrocephalus segmentation, with no fundamental differences in overall performance. However, nnU-Net demonstrated key advantages due to its lack of preprocessing requirements, which allow the successful handling of even the most challenging subjects. These features make it easily implementable for clinical applications, providing fast and reliable ventricular segmentation and quantification.

Indexed as

Cerebral AqueductCerebral VentriclesHydrocephalusImage Interpretation, Computer-AssistedMagnetic Resonance ImagingNeural Networks, ComputerAdolescentChildChild, PreschoolFemaleHumansMaleReproducibility of ResultsSensitivity and SpecificityYoung AdultDeep learningMRI analysisNnU-NetPediatric hydrocephalusVentricular segmentationVParNet

Identifiers

PMID41307664
PMCPMC12906524

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.