Evidence map›Paper›PMID 41306588›Full record

ArticleFrontiers in cellular and infection microbiology2025

A TBC1D9-Rab29 axis controls homeostatic NF-κB signaling and selective IL-6 production in epithelial cells.

Xin Hu, Takashi Nozawa, Atsuko Minowa-Nozawa, Kazunori Murase, Ichiro Nakagawa

Abstract read
In one paragraph

Article in Frontiers in cellular and infection microbiology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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0citing papers in PubMed
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1 · What the graph read from it

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2 · The registry

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3 · Its place in the literature

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4 · The record

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5 · Who and what money

Authors and funding

5 authors.

Xin HuDepartment of Microbiology, Graduate School of Medicine, Kyoto University, Kyoto, Japan.
Takashi Nozawa *Department of Microbiology, Graduate School of Medicine, Kyoto University, Kyoto, Japan.
Atsuko Minowa-NozawaDepartment of Microbiology, Graduate School of Medicine, Kyoto University, Kyoto, Japan.
Kazunori MuraseDepartment of Microbiology, Graduate School of Medicine, Kyoto University, Kyoto, Japan.
Ichiro Nakagawa *Department of Microbiology, Graduate School of Medicine, Kyoto University, Kyoto, Japan.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: Interleukin-6 (IL-6) plays a crucial role in inflammation and immune defense; however, its intracellular trafficking and the mechanisms regulating its expression remain poorly understood. Methods: We investigated epithelial cell responses to poly(dA:dT) stimulation and group A Results: TBC1D9, a Rab GTPase-activating protein, selectively regulates IL-6: its depletion reduced IL-6 mRNA and protein levels without broadly affecting other pro-inflammatory cytokines. TBC1D9 maintained basal p65 phosphorylation but was dispensable for stimulus-induced NF-κB activation, supporting the idea that homeostatic NF-κB signaling is necessary for constitutive IL-6 transcription. Proteomics identified Rab29 as a TBC1D9 partner; co-immunoprecipitation showed preferential interaction with GTP-dependent Rab29, and the two proteins co-localized following stimulation and infection. Rab29 overexpression inhibited NF-κB activation and IL-6 production, while Rab29 deficiency increased both, opposing TBC1D9's effect. Necrotizing soft tissue infection patients' datasets showed upregulation of TBC1D9 and IL-6-related pathways, revealing their clinical relevance. Conclusion: The TBC1D9-Rab29 axis connects GTPase signaling and membrane trafficking to specifically regulate IL-6 in epithelial cells, revealing a non-traditional mechanism for modulating inflammation and a potential target in IL-6-driven diseases.

Indexed as

Epithelial CellsGTPase-Activating ProteinsInterleukin-6NF-kappa Brab GTP-Binding ProteinsSignal TransductionCell LineHomeostasisHumansProteomicsGTPase-Activating ProteinsIL6 protein, humanInterleukin-6NF-kappa Brab GTP-Binding Proteinscytokine regulationinterleukin-6 (IL-6)NF-κB signalingRab29TBC1D9

Identifiers

PMID41306588
PMCPMC12643979

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.