Evidence map›Paper›PMID 41306285›Full record

ArticleFrontiers in cell and developmental biology2025

Proximity-based proteomics (BioID) uncovers the Rho GTPase interactome in kidney podocytes.

Sajida Ibrahim, Jun Matsuda, Zachary W Nurcombe, Jonathan Boulais, Lamine Aoudjit, Emily Foxman, Cyril Kazan, Soichiro Suzuki, Simon Leclerc, Naoyuki Shimada and 3 more

Abstract read
In one paragraph

Article in Frontiers in cell and developmental biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Review
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Sajida IbrahimResearch institute of the McGill University Health Centre (RI-MUHC), Montreal, QC, Canada.
Jun MatsudaDepartment of Nephrology, Graduate School of Medicine, The University of Osaka, Suita/Osaka, Japan.
Zachary W NurcombeResearch institute of the McGill University Health Centre (RI-MUHC), Montreal, QC, Canada.
Jonathan BoulaisMontreal Clinical Research Institute (IRCM), Montreal, QC, Canada.
Lamine AoudjitResearch institute of the McGill University Health Centre (RI-MUHC), Montreal, QC, Canada.
Emily FoxmanResearch institute of the McGill University Health Centre (RI-MUHC), Montreal, QC, Canada.
Cyril KazanResearch institute of the McGill University Health Centre (RI-MUHC), Montreal, QC, Canada.
Soichiro SuzukiResearch institute of the McGill University Health Centre (RI-MUHC), Montreal, QC, Canada.
Simon LeclercResearch institute of the McGill University Health Centre (RI-MUHC), Montreal, QC, Canada.
Naoyuki ShimadaDepartment of Nephrology, Graduate School of Medicine, The University of Osaka, Suita/Osaka, Japan.
Thomas KitzlerResearch institute of the McGill University Health Centre (RI-MUHC), Montreal, QC, Canada.
Jean-François CotéMontreal Clinical Research Institute (IRCM), Montreal, QC, Canada.
Tomoko TakanoResearch institute of the McGill University Health Centre (RI-MUHC), Montreal, QC, Canada.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Introduction: Podocyte injury causes proteinuria. Rho GTPases play critical roles in regulating the podocyte cytoskeleton, and their alteration leads to foot process effacement. Yet, their signaling networks remain poorly understood. Methodology: To address this, we mapped the interactomes of RhoA, Rac1, and Cdc42 in human podocytes using proximity-dependent biotin identification (BioID) labeling. Results and discussion: Our BioID analysis detected a total of 1927 interactions with AvgP ≥ 0.95. Approximately 50% of the interactions are unique to podocytes compared to interactions in HEK293 and HeLa cells, with enrichment in pathways related to cell adhesion and shape organization.

Indexed as

ARHGEF12BioIDCdc42KIAA1522podocyteRac1RhoA

Identifiers

PMID41306285
PMCPMC12644026

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.