Evidence map›Paper›PMID 41305533›Full record

ArticleViruses2025

Leveraging Classical Virology and High Throughput Sequencing for Viral Discovery Using a Historical Viral Collection.

Mark Sistrom, Matthew Neave, Ancy Joseph, Kim Newberry, Hannah Andrews, Cathy Shilton, Vidya Bhardwaj, Richard Weir

Abstract read
In one paragraph

Article in Viruses, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Mark SistromNorthern Territory Government Department of Health, Territory Pathology, Royal Darwin Hospital, Tiwi, NT 0810, Australia.
Matthew NeaveAustralian Centre for Disease Preparedness, Commonwealth Scientific and Industrial Research Organisation (CSIRO), Geelong, VIC 3220, Australia.ORCID 0000-0002-8108-0553
Ancy JosephAustralian Centre for Disease Preparedness, Commonwealth Scientific and Industrial Research Organisation (CSIRO), Geelong, VIC 3220, Australia.
Kim NewberryAustralian Centre for Disease Preparedness, Commonwealth Scientific and Industrial Research Organisation (CSIRO), Geelong, VIC 3220, Australia.
Hannah AndrewsNorthern Territory Government Department of Industry, Trade and Tourism, Berrimah Veterinary Laboratories, Darwin, NT 0801, Australia.
Cathy ShiltonNorthern Territory Government Department of Industry, Trade and Tourism, Berrimah Veterinary Laboratories, Darwin, NT 0801, Australia.
Vidya BhardwajNorthern Territory Government Department of Industry, Trade and Tourism, Berrimah Veterinary Laboratories, Darwin, NT 0801, Australia.
Richard WeirNorthern Territory Government Department of Industry, Trade and Tourism, Berrimah Veterinary Laboratories, Darwin, NT 0801, Australia.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Northern Australia has long been a hotbed of arboviral discovery, and collections of viral isolates from Northern Australia represent an invaluable resource for both our knowledge of viral diversity and for disease preparedness and treatment. While discovery of novel viruses via classical virology methods is on the decline, next generation sequencing offers the possibility to speed up viral discovery, albeit at the expense of the collection of valuable life history data. By sequencing unknown isolates from historical viral collections, we may leverage both the rich data collected through classical virology and the power of identification using contemporary sequencing technologies. In the present study, we sequenced 76 historical viral isolates held at the Berrimah Veterinary Laboratory in Darwin, northern Australia, for which serological typing had yielded ambiguous results. We determined that 43 of these isolates belong to the genera

Indexed as

High-Throughput Nucleotide SequencingVirologyVirusesAnimalsAustraliaGenome, ViralGenotypeHumansOrbivirusOrthobunyavirusPhylogenyarbovirusAustraliacattleHapavirusOrbivirusOrthobunyaviruszoonotic

Identifiers

PMID41305533
PMCPMC12656724

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.