Evidence map›Paper›PMID 41305408›Full record

ArticlePathogens (Basel, Switzerland)2025

Tracing the Zoonotic Origins of a Rare Human G5P[6] Rotavirus in Brazil.

Lais Sampaio de Azevedo, Vanessa Cristina Martins Silva, Yasmin França, Raquel Guiducci, Adriana Luchs

Abstract read
In one paragraph

Article in Pathogens (Basel, Switzerland), 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Lais Sampaio de AzevedoVirology Center, Adolfo Lutz Institute, Av. Dr Arnaldo, nº 355, São Paulo 01246-902, SP, Brazil.
Vanessa Cristina Martins SilvaVirology Center, Adolfo Lutz Institute, Av. Dr Arnaldo, nº 355, São Paulo 01246-902, SP, Brazil.ORCID 0000-0002-5303-5229
Yasmin FrançaVirology Center, Adolfo Lutz Institute, Av. Dr Arnaldo, nº 355, São Paulo 01246-902, SP, Brazil.
Raquel GuiducciVirology Center, Adolfo Lutz Institute, Av. Dr Arnaldo, nº 355, São Paulo 01246-902, SP, Brazil.
Adriana LuchsVirology Center, Adolfo Lutz Institute, Av. Dr Arnaldo, nº 355, São Paulo 01246-902, SP, Brazil.ORCID 0000-0003-4131-990X

Funding

Coordenação de Aperfeicoamento de Pessoal de Nível Superior #2022-0/88881.689557Fundação de Amparo à Pesquisa do Estado de São Paulo #2020/14786-0Fundação de Amparo à Pesquisa do Estado de São Paulo #2021/09064-8National Council for Scientific and Technological Development #310056/2023-3Postgraduate Program Support (PROAP-AUXPE) #2022/115Special Health Fund for Mass Immunization and Disease Control (FESIMA) CAF #017/2023Special Health Fund for Mass Immunization and Disease Control (FESIMA) CAF #042/2024
6 · The paper itself

Abstract

The porcine origin rotavirus A (RVA) G5 genotype is notable for its unique and sustained human circulation in Brazil, primarily as G5P[8] during the 1980s-2000s. This study aimed to characterize and investigate the full genome of a rare G5P[6] strain detected in 2013 (RVA/Human-wt/BRA/IAL-R406/2013/G5P[6]) to elucidate its evolutionary origin throughout RT-PCR, sequencing, and phylogenetic analysis. Whole-genome assessment revealed an atypical G5-P[6]-I1-R1-C1-M1-A8-N1-T7-E1-H1 constellation. The IAL-R406 VP7 (classified in Lineage I) was closely related to G5 strains that have circulated in both humans and pigs in Brazil for nearly three decades, showing no evidence of recent variant introduction. The VP4 P[6] (assigned as Lineage I) was genetically similar to Paraguayan and Argentinian G4P[6] porcine-like strains, indicating a regional swine reservoir and zoonotic RVA spillover in South America. The remaining nine segments support the animal-human reassortant origin of IAL-R406, showing broad similarity to porcine-like human and porcine strains described worldwide, with additional relationships to bovine (Republic of Korea, USA), feline-like human (Brazil), equine (UK), simian (Caribbean), wild boar/fox (Croatia), and classical human (Japan, USA) strains. In particular, the NSP1-A8 and NSP3-T7 genotypes, extremely rare in humans yet widespread in animals, especially swine, strongly indicate interspecies reassortment, likely resulting from porcine-to-human transmission. Together, these findings reinforce swine as a persistent reservoir for zoonotic RVA infections and highlight the importance of a One Health approach integrating human and animal surveillance to better understand RVA cross-species transmission and evolution.

Indexed as

RotavirusRotavirus InfectionsViral ZoonosesZoonosesAnimalsBrazilGenome, ViralGenotypeHumansPhylogenyReassortant VirusesSwineSwine Diseasesgastroenteritisgenetic diversityinterspecies transmissionmolecular epidemiologyrotavirus

Identifiers

PMID41305408
PMCPMC12655647

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.