Evidence map›Paper›PMID 41301544›Full record

ArticleBiomolecules2025

Evaluating the Topological Features of Monomeric and Trimeric TRAF2-C: A Multi-Disciplinary Approach.

Fulvio Erba, Daniela Russo, Velia Minicozzi, Luisa Di Paola, Sylvain Prevost, Anastasia De Luca, Giampiero Mei, Almerinda Di Venere

Abstract read
In one paragraph

Article in Biomolecules, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Fulvio ErbaDepartment of Clinical Science and Translational Medicine, Tor Vergata University of Rome, Via Montpellier 1, 00133 Rome, Italy.ORCID 0000-0002-7932-3528
Daniela RussoCNR-Istituto Officina dei Materiali, c/o Institut Laue Langevin, 71 Avenue des Martyrs, CS 20156, CEDEX 9, 38042 Grenoble, France.ORCID 0000-0001-6625-2284
Velia MinicozziDepartment of Physics, Section of Roma Tor Vergata, National Institute for Nuclear Physics (INF), University of Rome Tor Vergata, Via della Ricerca Scientifica 1, 00133 Rome, Italy.ORCID 0000-0001-9851-9932
Luisa Di PaolaUnit of Chemical-Physics Fundamentals in Chemical Engineering, Department of Engineering, University Campus Bio-Medico of Rome, Via Álvaro del Portillo 21, 00128 Rome, Italy.ORCID 0000-0001-5329-8689
Sylvain PrevostLarge Scale Structures, Institut Laue-Langevin,71 Avenue des Martyrs, CS 20156, CEDEX 9, 38042 Grenoble, France.ORCID 0000-0002-6008-1987
Anastasia De LucaDepartment of Biology, University of Rome Tor Vergata, Via della Ricerca Scientifica 1, 00133 Rome, Italy.ORCID 0000-0002-6532-989X
Giampiero MeiDepartment of Experimental Medicine, University of Rome Tor Vergata, Via Montpellier 1, 00133 Rome, Italy.ORCID 0000-0003-3772-9463
Almerinda Di VenereDepartment of Experimental Medicine, University of Rome Tor Vergata, Via Montpellier 1, 00133 Rome, Italy.ORCID 0000-0002-9493-0270

Funding

Ministero dell'università e della ricerca 2022PJKF88
6 · The paper itself

Abstract

This study investigates the structural dynamics of the TRAF2 C-terminal domain (TRAF2-C), a key adaptor protein in TNF receptor signaling. TRAF2 usually forms trimers, but its ability to dissociate into monomers is critical for regulating apoptosis, inflammation, and cell survival. Using Fluorescence Fluctuation Spectroscopy, dynamic light scattering, circular dichroism, and Small Angle Neutron Scattering, we analyzed TRAF2-C over a wide concentration range. At nanomolar levels, the protein dissociates easily, with trimers representing only a minor fraction, while micromolar concentrations strongly favor trimerization. Dissociation also reduces α-helical content without disrupting the overall fold. Molecular dynamics simulations and protein contact network analysis support this analysis, identifying interfacial residues and hydrogen bonds as key factors stabilizing oligomers and enabling dynamic asymmetry. Overall, these findings highlight TRAF2-C's capacity to switch between monomeric and trimeric states as a crucial regulatory mechanism, offering insights into TRAF-mediated signaling and potential therapeutic strategies.

Indexed as

TNF Receptor-Associated Factor 2HumansHydrogen BondingMolecular Dynamics SimulationProtein MultimerizationSignal TransductionTNF Receptor-Associated Factor 2oligomerizationprotein dynamicsTNF receptor signalingTRAF2-C

Identifiers

PMID41301544
PMCPMC12650658

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.