Evidence map›Paper›PMID 41299059›Full record

ArticleScientific reports2025

Deep learning classification of INSV-associated weeds in Monterey county using a curated RGB image dataset.

Arun K Sharma, Arun D Jani, Elijah Brunnengraeber, Jaeyun Choi, Ruby Fife, Supreet Gandhok, Katelyn Huie, Alyssa Beth Ilano, Eduardo Lopez, Matthew Lopez and 5 more

Abstract readValidation Study
In one paragraph

Article in Scientific reports, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

Arun K SharmaDepartment of Biology, Agriculture, and Chemistry, California State University, Monterey Bay, Seaside, CA, 93955, USA. arsharma@csumb.edu.
Arun D JaniDepartment of Biology, Agriculture, and Chemistry, California State University, Monterey Bay, Seaside, CA, 93955, USA.
Elijah BrunnengraeberDepartment of Biology, Agriculture, and Chemistry, California State University, Monterey Bay, Seaside, CA, 93955, USA.
Jaeyun ChoiDepartment of Biology, Agriculture, and Chemistry, California State University, Monterey Bay, Seaside, CA, 93955, USA.
Ruby FifeDepartment of Biology, Agriculture, and Chemistry, California State University, Monterey Bay, Seaside, CA, 93955, USA.
Supreet GandhokDepartment of Biology, Agriculture, and Chemistry, California State University, Monterey Bay, Seaside, CA, 93955, USA.
Katelyn HuieDepartment of Biology, Agriculture, and Chemistry, California State University, Monterey Bay, Seaside, CA, 93955, USA.
Alyssa Beth IlanoDepartment of Biology, Agriculture, and Chemistry, California State University, Monterey Bay, Seaside, CA, 93955, USA.
Eduardo LopezDepartment of Biology, Agriculture, and Chemistry, California State University, Monterey Bay, Seaside, CA, 93955, USA.
Matthew LopezDepartment of Biology, Agriculture, and Chemistry, California State University, Monterey Bay, Seaside, CA, 93955, USA.
Owen McMillanDepartment of Biology, Agriculture, and Chemistry, California State University, Monterey Bay, Seaside, CA, 93955, USA.
Alyssa ParraDepartment of Biology, Agriculture, and Chemistry, California State University, Monterey Bay, Seaside, CA, 93955, USA.
Trevor PollockDepartment of Biology, Agriculture, and Chemistry, California State University, Monterey Bay, Seaside, CA, 93955, USA.
Dylan WoodbridgeDepartment of Biology, Agriculture, and Chemistry, California State University, Monterey Bay, Seaside, CA, 93955, USA.
Rylend YoungDepartment of Biology, Agriculture, and Chemistry, California State University, Monterey Bay, Seaside, CA, 93955, USA.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Weeds, defined by their ecological and economic impact rather than taxonomy, present a major challenge to agriculture by competing with crops for limited resources and serving as vectors for disease. In Monterey County, California, one of the most productive farming regions in the United States, Sonchus oleraceus (annual sowthistle) and Malva parviflora (little mallow) have been linked to over $150 million in crop losses due to their role in spreading Impatiens Necrotic Spot Virus (INSV). As precision agriculture becomes more important in high-value production systems, deep learning and image-based classification offer promising tools for early weed detection and disease prevention. To address the absence of region-specific image datasets, this study presents the first curated, high-resolution image collection of INSV-associated weeds from Monterey County, captured under greenhouse conditions designed to mimic field variability. This dataset fills a documented gap in existing global repositories such as PlantCLEF and DeepWeeds, which lack representation of California's high-value crop systems. This study compares three convolutional neural networks-ResNet-50, ResNet-101, and DenseNet-121-for classifying these visually similar weeds under controlled conditions that approximate real field environments. RGB images were augmented to improve model robustness, and training was conducted across ten independent stratified data splits.Among the tested architectures, ResNet-101 achieved the highest median classification accuracy (91%) and Cohen's Kappa (0.87), while DenseNet-121 demonstrated the strongest F1-score and AUC values exceeding 0.99. These results confirm that dataset augmentation substantially enhanced model generalization. The results demonstrate that deep learning can support accurate and reliable weed identification, paving the way for real-time detection systems and more targeted, sustainable weed control practices in precision agriculture.

Indexed as

Convolutional Neural NetworksDeep LearningImage Processing, Computer-AssistedPlant WeedsCaliforniaDatasets as TopicMalvaPlant DiseasesSonchus

Identifiers

PMID41299059
PMCPMC12749732

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.