Evidence map›Paper›PMID 41298963›Full record

ArticleScientific reports2025

Improving social determinants of health documentation in French electronic health records using large language models.

Adrien Bazoge, Pacôme Constant Dit Beaufils, Mohammed Hmitouch, Romain Bourcier, Emmanuel Morin, Richard Dufour, Béatrice Daille, Pierre-Antoine Gourraud, Matilde Karakachoff

Abstract readEvaluation Study
In one paragraph

Article in Scientific reports, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Adrien Bazoge *Nantes Université, CHU Nantes, Pôle Hospitalo-Universitaire 11: Santé Publique, Clinique des données, INSERM, CIC 1413, 44000, Nantes, France. adrien.bazoge@univ-nantes.fr.
Pacôme Constant Dit Beaufils *Nantes Université, CHU Nantes, Pôle Hospitalo-Universitaire 11: Santé Publique, Clinique des données, INSERM, CIC 1413, 44000, Nantes, France.
Mohammed HmitouchNantes Université, CHU Nantes, Pôle Hospitalo-Universitaire 11: Santé Publique, Clinique des données, INSERM, CIC 1413, 44000, Nantes, France.
Romain BourcierNantes Université, CHU Nantes, Service de neuroradiologie diagnostique et interventionnelle, l'institut du thorax, 44000, Nantes, France.
Emmanuel MorinNantes Université, École Centrale Nantes, CNRS, LS2N, UMR 6004, 44000, Nantes, France.
Richard DufourNantes Université, École Centrale Nantes, CNRS, LS2N, UMR 6004, 44000, Nantes, France.
Béatrice DailleNantes Université, École Centrale Nantes, CNRS, LS2N, UMR 6004, 44000, Nantes, France.
Pierre-Antoine GourraudNantes Université, CHU Nantes, Pôle Hospitalo-Universitaire 11: Santé Publique, Clinique des données, INSERM, CIC 1413, 44000, Nantes, France.
Matilde KarakachoffNantes Université, CHU Nantes, Pôle Hospitalo-Universitaire 11: Santé Publique, Clinique des données, INSERM, CIC 1413, 44000, Nantes, France.

Funding

Agence Nationale de la Recherche ANR-16-IDEX-0007Agence Nationale de la Recherche ANR-20-THIA-0011Agence Nationale de la Recherche ANR-23-IAS1-0005French Ministry of Health DAtAE2023-15744432
6 · The paper itself

Abstract

Social determinants of health (SDoH) significantly influence health outcomes, shaping disease progression, treatment adherence, and health disparities. However, their documentation in structured electronic health records (EHRs) is often incomplete or missing. This study presents an approach based on large language models (LLMs) for extracting 13 SDoH categories from French clinical notes. We trained Flan-T5-Large on annotated social history sections from clinical notes at Nantes University Hospital, France. We evaluated the model at two levels: (i) identification of SDoH categories and associated values, and (ii) extraction of detailed SDoH with associated temporal and quantitative information. The model performance was assessed across four datasets, including two that we publicly release as open resources. The model achieved strong performance for identifying well-documented categories such as living condition, marital status, descendants, job, tobacco, and alcohol use (F1 score > 0.80). Performance was lower for categories with limited training data or highly variable expressions, such as employment status, housing, physical activity, income, and education. Our model identified 95.8% of patients with at least one SDoH, compared to 2.8% for ICD-10 codes from structured EHR data. Our error analysis showed that performance limitations were linked to annotation inconsistencies, reliance on English-centric tokenizer, and reduced generalizability due to the model being trained on social history sections only. These results demonstrate the effectiveness of NLP in improving the completeness of real-world SDoH data in a non-English EHR system.

Indexed as

Electronic Health RecordsLarge Language ModelsSocial Determinants of HealthFranceHumansBiomedical data warehouseElectronic health recordsNatural language processingSocial determinant of health

Identifiers

PMID41298963
PMCPMC12749410

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.