Evidence map›Paper›PMID 41292992›Full record

ArticlebioRxiv : the preprint server for biology2025

Computational redesign of a thermostable T7 RNA polymerase.

Zachary T Baumer, Timothy A Whitehead

Abstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

2 authors.

Zachary T BaumerDepartment of Chemical and Biological Engineering, University of Colorado Boulder; Boulder, 80305, USA.
Timothy A WhiteheadDepartment of Chemical and Biological Engineering, University of Colorado Boulder; Boulder, 80305, USA.

Funding

Purchase of a CD SpectropolarimeterS10RR028036 · NCRR · UNIVERSITY OF COLORADO · PI WUTTKE, DEBORAH S. · 2010 to 2010
$194k
NCRR NIH HHS S10 RR028036
6 · The paper itself

Abstract

T7 RNA polymerase (T7 RNAP) is a foundational enzyme for biotechnology, but its utility for many potential applications is limited by low thermal stability of 43-44°C. While stabilized variants exist, the most stable commercial version has a proprietary sequence. In this work we developed a highly stable T7 RNAP using structure-based computational design. We combined mutations from previous stabilized variants (M5, M8, V7abcd) with new mutations identified by PROSS. These mutations were filtered using data-driven heuristics to preserve function. Our final design, T7

Identifiers

PMID41292992
PMCPMC12642643

What OpenQuestion holds

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LicenceCC BY-ND
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.