Evidence map›Paper›PMID 41291450›Full record

ArticleBMC genomics2025

Transcriptomic and metabolomic basis of seasonal auditory sensitivity variations in the red-eared slider (Trachemys scripta elegans).

Ningning Lu, Tongliang Wang, Xiaofei Zhai, Jichao Wang

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Article in BMC genomics, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

4 authors.

Ningning LuMinistry of Education Key Laboratory for Ecology of Tropical Islands, Key Laboratory of Tropical Animal and Plant Ecology of Hainan Province, College of Life Sciences, Hainan Normal University, Haikou, 571158, China.
Tongliang WangMinistry of Education Key Laboratory for Ecology of Tropical Islands, Key Laboratory of Tropical Animal and Plant Ecology of Hainan Province, College of Life Sciences, Hainan Normal University, Haikou, 571158, China.
Xiaofei ZhaiMinistry of Education Key Laboratory for Ecology of Tropical Islands, Key Laboratory of Tropical Animal and Plant Ecology of Hainan Province, College of Life Sciences, Hainan Normal University, Haikou, 571158, China.
Jichao WangMinistry of Education Key Laboratory for Ecology of Tropical Islands, Key Laboratory of Tropical Animal and Plant Ecology of Hainan Province, College of Life Sciences, Hainan Normal University, Haikou, 571158, China. wjc@hainnu.edu.cn.ORCID http://orcid.org/0000-0001-5081-2355

Funding

National Natural Science Foundation of China 31860608
6 · The paper itself

Abstract

backgroundAuditory brainstem response (ABR) tests have demonstrated that the peripheral auditory sensitivity of the red-eared slider (Trachemys scripta elegans) exhibits seasonal variation, with enhanced sensitivity observed in spring compared to winter. However, the molecular mechanisms underlying these seasonal shifts remain unclear.

resultsCombined transcriptomic and metabolomic analyses revealed significant seasonal changes between sexes. Transcriptomic profiling identified pronounced organ-specific patterns, with the inner ear exhibiting the most profound seasonal reprogramming, as identified by Weighted Gene Co-expression Network Analysis (WGCNA), while the brain showed minimal changes. These changes primarily involved pathways associated with sensory transduction, neurotransmission, ion homeostasis, cytoskeletal organization, and intercellular communication. Key genes (including GJB2, GJB6, OTOA, and OTOG) showed marked differential expression between seasons. Metabolomic profiling further identified seasonal differences in carbohydrate metabolism, with elevated levels of oxaloacetic acid and succinic acid (TCA cycle intermediates) alongside propionic acid (a precursor feeding into the TCA cycle via propanoate metabolism) in spring, collectively suggesting intensified energy metabolism that may support enhanced auditory function.

conclusionsThese results provide molecular and metabolic insights into the seasonal plasticity of auditory sensitivity in red-eared sliders. The upregulation of key genes and metabolites related to energy metabolism and neural function during spring may facilitate improved auditory performance. This study enhances our understanding of the adaptive mechanisms underlying sensory plasticity in reptiles.

Indexed as

MetabolomeMetabolomicsSeasonsTranscriptomeTurtlesAnimalsEvoked Potentials, Auditory, Brain StemFemaleGene Expression ProfilingMaleAuditory sensitivityMetabolomeSeasonTrachemys scripta elegansTranscriptome

Identifiers

PMID41291450
PMCPMC12751183

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.