Evidence map›Paper›PMID 41291334›Full record

ArticleNature structural & molecular biology2026

Heterochromatin boundaries maintain centromere position, size and number.

Ben L Carty, Danilo Dubocanin, Marina Murillo-Pineda, Marie Dumont, Emilia Volpe, Pawel Mikulski, Julia Humes, Oliver Whittingham, Daniele Fachinetti, Simona Giunta and 2 more

Erratum issuedAbstract read
In one paragraph

Article in Nature structural & molecular biology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed.

  1. Review
  2. Article
  3. Genetic mechanisms of mitotic error in 840,853 blood genomes.medRxiv : the preprint server for health sciences · 2026
    Article
  4. Article
  5. Article
  6. HOROSCOPE: Decoding human centromere architecture from short reads usingbioRxiv : the preprint server for biology · 2026
    Article
  7. Review
  8. Article
  9. Article
  10. The CENP-A chaperone complex spatially organizes centromeres.bioRxiv : the preprint server for biology · 2025
    Article
  11. Preserving centromere identity: right amounts of CENP-A at the right place and time.Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 2025
    Review
  12. A brief historical perspective on cell cycle control of CENP-A assembly and inheritance.Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 2025
    Review
  13. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

12 authors.

Ben L CartyDept of Biochemistry, University of Oxford, Oxford, UK.ORCID http://orcid.org/0000-0002-4356-3052
Danilo DubocaninDepartment of Genetics, Stanford University, Palo Alto, CA, USA.ORCID http://orcid.org/0000-0003-0330-5814
Marina Murillo-PinedaDept of Biochemistry, University of Oxford, Oxford, UK.ORCID http://orcid.org/0000-0003-0294-3849
Marie DumontUMR144 and UMR3664, CNRS, Institut Curie, PSL Research University, Sorbonne Université, Paris, France.
Emilia VolpeLaboratory of Genome Evolution, Department of Biology and Biotechnologies 'Charles Darwin', University of Rome 'La Sapienza', Rome, Italy.
Pawel MikulskiDept of Biochemistry, University of Oxford, Oxford, UK.ORCID http://orcid.org/0000-0002-8899-6062
Julia HumesDept of Biochemistry, University of Oxford, Oxford, UK.
Oliver WhittinghamDept of Biochemistry, University of Oxford, Oxford, UK.
Daniele FachinettiUMR144 and UMR3664, CNRS, Institut Curie, PSL Research University, Sorbonne Université, Paris, France.ORCID http://orcid.org/0000-0002-8795-6771
Simona GiuntaLaboratory of Genome Evolution, Department of Biology and Biotechnologies 'Charles Darwin', University of Rome 'La Sapienza', Rome, Italy.ORCID http://orcid.org/0000-0002-6666-9271
Nicolas AltemoseDepartment of Genetics, Stanford University, Palo Alto, CA, USA.ORCID http://orcid.org/0000-0002-7231-6026
Lars E T JansenDept of Biochemistry, University of Oxford, Oxford, UK. lars.jansen@bioch.ox.ac.uk.ORCID http://orcid.org/0000-0002-2158-0345

Funding

Wellcome Trust 210645Wellcome Trust 304643
6 · The paper itself

Abstract

Centromeres are defined by a unique single chromatin domain featuring the histone H3 variant, centromere protein A (CENP-A), and ensure proper chromosome segregation. Centromeric chromatin typically occupies a small subregion of low DNA methylation within multimegabase arrays of hypermethylated alpha-satellite repeats and constitutive pericentric heterochromatin. Here, we define the molecular basis of how heterochromatin serves as a primary driver of centromere and neocentromere position, size and number. Using single-molecule epigenomics, we uncover roles for H3K9me3 methyltransferases SUV39H1/H2 and SETDB1, in addition to noncanonical roles for SUZ12, in maintaining H3K9me3 boundaries at centromeres. Loss of these heterochromatin boundaries leads to the progressive expansion and/or repositioning of the primary CENP-A domain, erosion of surrounding DNA methylation and nucleation of additional functional CENP-A domains across the same alpha-satellite sequences. Our study identifies the functional importance and specialization of different H3K9 methyltransferases across centromeric and pericentric domains, crucial for maintaining centromere domain size and suppressing ectopic centromere nucleation events.

Indexed as

CentromereHeterochromatinAnimalsCentromere Protein ADNA MethylationHistone-Lysine N-MethyltransferaseHistonesHumansMethyltransferasesPolycomb Repressive Complex 2Repressor ProteinsCentromere Protein AHeterochromatinHistone-Lysine N-MethyltransferaseHistonesMethyltransferasesPolycomb Repressive Complex 2Repressor ProteinsSETDB1 protein, humanSUV39H1 protein, human

Identifiers

PMID41291334
PMCPMC7618434

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.