Evidence map›Paper›PMID 41291038›Full record

ArticleNPJ digital medicine2025

Information content as a health system screening tool for rare diseases.

Tudor Groza, Peter N Robinson, Weng Khong Lim, Kaavya Narasimhalu, Jenny Hsieh, Khung Keong Yeo, Goh Bee Keow, Terrence Thomas, Tien Yin Wong, Neerja Karnani and 2 more

Abstract read
In one paragraph

Article in NPJ digital medicine, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Tudor GrozaGenetics service, KK Women's and Children's Hospital, Singapore, Singapore. tudorg@bii.a-star.edu.sg.
Peter N RobinsonBerlin Institute of Health, Berlin, Germany.
Weng Khong LimSingHealth Duke-NUS Institute of Precision Medicine, Singapore, Singapore.
Kaavya NarasimhaluDepartment of Neurology, National Neuroscience Institute (Singapore General Hospital Campus), Singapore, Singapore.
Jenny HsiehDepartment of Internal Medicine, Singapore General Hospital, Singapore, Singapore.
Khung Keong YeoDepartment of Cardiology, National Heart Centre Singapore, Singapore, Singapore.
Goh Bee KeowData Analytics Office, KK Women's and Children's Hospital, Singapore, Singapore.
Terrence ThomasNeurology Service, KK Women's and Children's Hospital, Singapore, Singapore.
Tien Yin WongBeijing Visual Science and Translational Eye Research Institute (BERI), School of Clinical Medicine, Tsinghua Medicine, Tsinghua University, Beijing, China.
Neerja KarnaniBioinformatics Institute (BII), Agency for Science, Technology and Research (A*STAR), Singapore, Singapore.
Gareth BaynamRare Care Centre, Perth Children's Hospital, Perth, WA, Australia.
Saumya Shekhar JamuarGenetics service, KK Women's and Children's Hospital, Singapore, Singapore.

Funding

National Medical Research Council NMRC/CSAINVJun21-0003National Precision Medicine Programme (NPM) PHASE II FUNDING MOH-000588
6 · The paper itself

Abstract

Rare diseases (RD) affect 3.5-5.9% of the global population, yet patients often endure a diagnostic odyssey averaging around 5-6 years, navigating multiple specialties and referrals. This study investigates the use of information content (IC) as a screening tool to identify RD candidates using SNOMED CT, the clinical terminology standard for the electronic health record (EHR) in the Singapore health system. A longitudinal dataset of 1,274,199 patients (2018-2022) containing 35,898 unique SNOMED terms was analyzed. Rare disease patients (n = 17,575) were identified through SNOMED-Orphanet mappings. IC effectively distinguished RD patient profiles from the first clinical encounter by applying outcome-driven thresholds. The simplicity of implementing the proposed method enables a screening test that can achieve ~95% sensitivity, while maintaining the potential follow-up burden at a reasonable level (20% precision starting from 3 encounters, with an IC threshold of 8.17). This approach also surfaced 71 underdiagnosed rare diseases in the population (57 of genetic origin). To our knowledge, this is the first study to apply information-theoretic metrics to EHR for RD screening, demonstrating its potential as a screening tool at both hospital and health system levels.

Identifiers

PMID41291038
PMCPMC12647614

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.