Evidence map›Paper›PMID 41290835›Full record

ArticleScientific reports2025

Molecular dynamics and COSMO-RS model of menthol-fatty acid deep eutectic solvents: thermodynamic, structural, and dynamics insights.

Mitra Dabbagh Hosseini Pour, Jaber Jahanbin Sardroodi, Naghmeh Hadidi, Gholamreza Pazuki

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Article in Scientific reports, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

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3citing papers in PubMed
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1 · What the graph read from it

What it found

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2 · The registry

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3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

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4 · The record

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PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Mitra Dabbagh Hosseini PourMolecular Simulation Lab, Azarbaijan Shahid Madani University, Tabriz, Iran.
Jaber Jahanbin SardroodiMolecular Simulation Lab, Azarbaijan Shahid Madani University, Tabriz, Iran. jsardroodi@azaruniv.ac.ir.
Naghmeh HadidiDepartment of Clinical Research and EM Microscope, Pasteur Institute of Iran (PII), Tehran, Iran.
Gholamreza PazukiDepartment of Chemical Engineering, Amirkabir University of Technology, Tehran, Iran. ghpazuki@aut.ac.ir.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Deep eutectic solvents (DESs) have emerged as sustainable alternatives to conventional solvents; however, our molecular-scale understanding of their intrinsic properties remains limited. In this study, we investigate menthol-fatty acid (valeric acid, enanthic acid, and pelargonic acid) DESs through a synergistic framework that combines molecular dynamics (MD) simulations, the conductor-like screening model (COSMO-RS) predictions, and Kirkwood-Buff integral (KBI) analysis. Our MD simulations reveal how the concentration and length of fatty acid chains influence the microscopic structure and dynamics within mixtures. COSMO-RS calculations provide predictive insights into activity coefficients and solvation tendencies, aligning closely with our atomistic results. Additionally, KBI analyses quantify preferential interactions, and isothermal compressibility, establishing a strong thermodynamic connection between microscopic ordering and macroscopic properties. Our findings demonstrate that subtle variations in fatty acid chain length affect the stability, heterogeneity, and transport behavior of these mixtures. This provides a rational approach for tuning their properties. Beyond these systems, the combined use of MD, COSMO-RS, and KBI methods presents a transferable and predictive protocol for designing DESs with tailored functionalities. This research enhances our understanding of the organization and thermodynamics of DESs, while also providing essential design principles to promote their application in bioprocessing and separation technologies. DES systems were designed using VMD and PACKMOL to arrange HBDs and HBAs. After performing energy minimization and equilibration at a temperature of 298.15 K, these systems were simulated under NPT conditions for 50 nanoseconds to allow for structural relaxation. Thermodynamic and solvation properties were estimated using COSMO-RS model, while electronic structure calculations were conducted using TURBOMOLE at the triple zeta valence potential (TZVP) basis set. This multiscale approach integrates molecular dynamics, and continuum solvation modelling to thoroughly characterize the structural and thermodynamic properties of menthol-fatty acid DESs.

Indexed as

COSMO-RS modelDeep eutectic solvents (DESs)Kirkwood–Buff integralsMolecular dynamic simulationStructural and dynamical propertiesThermodynamic properties

Identifiers

PMID41290835
PMCPMC12647832

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.