Evidence map›Paper›PMID 41289092›Full record

ArticleGenomics, proteomics & bioinformatics2025

Regulation of Alternative Polyadenylation Events by PABPC1 Affects Erythroid Progenitor Cell Expansion.

Yanan Li, Yanbo Yang, Bin Hu, Zi Wang, Wei Wang, Xiaofeng He, Xusheng Wu, Sheng Lin, Narla Mohandas, Hong Liu and 3 more

Abstract read
In one paragraph

Article in Genomics, proteomics & bioinformatics, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Review
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Yanan LiDepartment of Hematology, the Second Xiangya Hospital; Molecular Biology Research Center, Hunan Province Key Laboratory of Basic and Applied Hematology, School of Life Sciences, Central South University, Changsha 410013, China.ORCID 0000-0001-7821-8315
Yanbo YangHubei Key Laboratory of Agricultural Bioinformatics, College of Informatics, Huazhong Agricultural University, Wuhan 430070, China.ORCID 0000-0002-6084-2862
Bin HuDepartment of Hematology, the Second Xiangya Hospital; Molecular Biology Research Center, Hunan Province Key Laboratory of Basic and Applied Hematology, School of Life Sciences, Central South University, Changsha 410013, China.ORCID 0000-0003-3710-3786
Zi WangDepartment of Hematology, the Second Xiangya Hospital; Molecular Biology Research Center, Hunan Province Key Laboratory of Basic and Applied Hematology, School of Life Sciences, Central South University, Changsha 410013, China.ORCID 0000-0003-3892-827X
Wei WangDepartment of Radiology, The Third Xiangya Hospital of Central South University, Changsha 410013, China.ORCID 0000-0002-3409-7846
Xiaofeng HeShenzhen Health Development Research and Data Management Center, Shenzhen 518000, China.ORCID 0009-0003-1431-7308
Xusheng WuShenzhen Health Development Research and Data Management Center, Shenzhen 518000, China.ORCID 0009-0001-2651-0813
Sheng LinShenzhen Health Development Research and Data Management Center, Shenzhen 518000, China.ORCID 0000-0003-1076-5106
Narla MohandasResearch Laboratory of Red Cell Physiology, New York Blood Center, New York, NY 10065, USA.ORCID 0000-0003-2271-5296
Hong LiuDepartment of Dermatology, Xiangya Hospital, Central South University, Changsha 410008, China.ORCID 0000-0001-9976-2985
Jing GongHubei Key Laboratory of Agricultural Bioinformatics, College of Informatics, Huazhong Agricultural University, Wuhan 430070, China.ORCID 0000-0003-1895-2993
Long LiangDepartment of Hematology, the Second Xiangya Hospital; Molecular Biology Research Center, Hunan Province Key Laboratory of Basic and Applied Hematology, School of Life Sciences, Central South University, Changsha 410013, China.ORCID 0000-0002-2538-6726
Jing LiuDepartment of Hematology, the Second Xiangya Hospital; Molecular Biology Research Center, Hunan Province Key Laboratory of Basic and Applied Hematology, School of Life Sciences, Central South University, Changsha 410013, China.ORCID 0000-0001-5588-3865

Funding

Hunan Province Clinical Medical Technology Innovation Guidance 2021SK50917Hunan Province Clinical Medical Technology Innovation Guidance 2023SK4056National Key R&D Program of China 2018YFA0107800National Natural Science Foundation of China 81470362National Natural Science Foundation of China 81702722National Natural Science Foundation of China 81770107National Natural Science Foundation of China 81870105National Natural Science Foundation of China 81920108004National Natural Science Foundation of China 82100137National Natural Science Foundation of China 82270127National Natural Science Foundation of China U1804282Postgraduate Scientific Research Innovation Project of Hunan Province CX20210182
6 · The paper itself

Abstract

Erythropoiesis is precisely regulated by multilayered networks. It is crucial for maintaining steady-state hemoglobin levels and ensuring effective oxygen transport. Alternative polyadenylation (APA) is a post-transcriptional regulatory mechanism generating multiple mRNA isoforms from a single gene based on specific 3' untranslated region sequences. While APA plays a vital role in various cellular processes, the underlying mechanism in erythropoiesis remains largely unexplored. In this study, we employed an integrative approach, combining bioinformatics analyses and experimental validations, to systematically investigate the role of APA in erythropoiesis. We mapped the APA landscape during erythroid differentiation and identified significant APA shifts essential for the differentiation of erythroid cells from burst-forming unit erythroid (BFU-E) to colony-forming unit erythroid (CFU-E). Notably, our findings highlighted polyadenylate-binding protein cytoplasmic 1 (PABPC1) as the primary regulator of APA during these stages. Functional analyses have revealed that knockdown of PABPC1 disrupts erythroid progenitor cell proliferation and differentiation. These results implicate an essential role of PABPC1 in modulating cell fate through APA regulation. Furthermore, we found that decreased PABPC1 levels increased the usage of the proximal polyadenylation sites in the TSC22 domain family member 1 (TSC22D1) gene. This shift led to elevated expression of TSC22D1, uncovering a novel mechanism by which APA influences erythroid progenitor expansion and differentiation. Our findings provide novel insights into APA regulation in early erythropoiesis and suggest potential therapeutic strategies for diseases associated with erythropoietic disorders.

Indexed as

Erythroid Precursor CellsErythropoiesisPoly(A)-Binding Protein IPolyadenylationAnimalsCell DifferentiationCell ProliferationHumansMiceRNA, MessengerPoly(A)-Binding Protein IRNA, MessengerAlternative polyadenylationErythroid progenitorErythropoiesisPABPC1TSC22D1

Identifiers

PMID41289092
PMCPMC13245397

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.