Evidence map›Paper›PMID 41285828›Full record

ArticleScientific reports2025

Challenges and best practices when using ComBAT to harmonize diffusion MRI data.

Pierre-Marc Jodoin, Manon Edde, Gabriel Girard, Felix Dumais, Guillaume Theaud, Matthieu Dumont, Jean-Christophe Houde, Yoan David, Maxime Descoteaux, Alzheimer’s Disease Neuroimaging Initiative

Abstract read
In one paragraph

Article in Scientific reports, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Pierre-Marc JodoinVitaLab, Dep of Computer Science, University of Sherbrooke, Sherbrooke, Qc, J1K 2R1, Canada. Pierre-Marc.Jodoin@usherbrooke.ca.
Manon EddeSherbrooke Connectivity Imaging Lab (SCIL), Dep of Computer Science, University of Sherbrooke, Sherbrooke, Qc, J1K 2R1, Canada.
Gabriel GirardSherbrooke Connectivity Imaging Lab (SCIL), Dep of Computer Science, University of Sherbrooke, Sherbrooke, Qc, J1K 2R1, Canada.
Felix DumaisVitaLab, Dep of Computer Science, University of Sherbrooke, Sherbrooke, Qc, J1K 2R1, Canada.
Guillaume TheaudImeka Solutions Inc., Sherbrooke, Qc, J1H 4A7, Canada.
Matthieu DumontImeka Solutions Inc., Sherbrooke, Qc, J1H 4A7, Canada.
Jean-Christophe HoudeImeka Solutions Inc., Sherbrooke, Qc, J1H 4A7, Canada.
Yoan DavidVitaLab, Dep of Computer Science, University of Sherbrooke, Sherbrooke, Qc, J1K 2R1, Canada.
Maxime DescoteauxSherbrooke Connectivity Imaging Lab (SCIL), Dep of Computer Science, University of Sherbrooke, Sherbrooke, Qc, J1K 2R1, Canada.
Alzheimer’s Disease Neuroimaging Initiative

Funding

Alzheimer's Disease Neuroimaging Initiative - SupplementU01AG024904 · NIA · NORTHERN CALIFORNIA INSTITUTE RES &EDUC · PI WEINER, MICHAEL W · 2004 to 2015
$121.0M
NIA NIH HHS U01 AG024904
6 · The paper itself

Abstract

Over the years, ComBAT has become the standard method for harmonizing MRI-derived measurements, with its ability to compensate for site-related additive and multiplicative biases while preserving biological variability. However, ComBAT relies on a set of assumptions that, when violated, can result in flawed harmonization. In this paper, we thoroughly review ComBAT's mathematical foundation, outlining these assumptions, and exploring their implications for the demographic composition necessary for optimal results. Through a series of experiments involving a slightly modified version of ComBAT called Pairwise-ComBAT tailored for normative modeling applications, we assess the impact of various population characteristics, including population size, age distribution, the absence of certain covariates, and the magnitude of additive and multiplicative factors. Based on these experiments, we present five essential recommendations that should be carefully considered to enhance consistency and supporting reproducibility, two essential factors for open science, collaborative research, and real-life clinical deployment.

Indexed as

Diffusion Magnetic Resonance ImagingImage Processing, Computer-AssistedHumansReproducibility of Results

Identifiers

PMID41285828
PMCPMC12644733

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.