Evidence map›Paper›PMID 41285768›Full record

ArticleNature communications2025

Cytoplasmic fluidity and the cold life: proteome stability is decoupled from viability in psychrophiles.

Beatrice Caviglia, Stepan Timr, Marianne Guiral, Marie-Thérèse Giudici-Orticoni, Tilo Seydel, Christian Beck, Judith Peters, Fabio Sterpone, Alessandro Paciaroni

Abstract read
In one paragraph

Article in Nature communications, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Non-Fickian diffusion within assemblies of the intrinsically disordered protein β-casein.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Beatrice CavigliaDepartment of Physics and Geology, University of Perugia, via Alessandro Pascoli, Perugia, Italy.ORCID http://orcid.org/0009-0001-2852-6931
Stepan TimrJ. Heyrovsky Institute of Physical Chemistry, Czech Academy of Sciences, Dolejskova 2155/3, 182 00 Prague 8, Europe, Czech Republic.ORCID http://orcid.org/0000-0002-5824-4476
Marianne GuiralLaboratoire de Bioénergétique et Ingénierie des Protéines, BIP, CNRS, Aix-Marseille Université, Marseille, France.
Marie-Thérèse Giudici-OrticoniLaboratoire de Bioénergétique et Ingénierie des Protéines, BIP, CNRS, Aix-Marseille Université, Marseille, France.
Tilo SeydelInstitut Laue-Langevin, 71 avenue des Martyrs CS 20156, Grenoble, France.ORCID http://orcid.org/0000-0001-9630-1630
Christian BeckInstitut Laue-Langevin, 71 avenue des Martyrs CS 20156, Grenoble, France.ORCID http://orcid.org/0000-0001-7214-3447
Judith PetersInstitut Laue-Langevin, 71 avenue des Martyrs CS 20156, Grenoble, France. jpeters@ill.fr.
Fabio SterponeUniversité Paris Cité, CNRS, Laboratoire de Biochimie Théorique, 13 rue Pierre et Marie Curie, Paris, France. fabio.sterpone@ibpc.fr.ORCID http://orcid.org/0000-0003-0894-8069
Alessandro PaciaroniDepartment of Physics and Geology, University of Perugia, via Alessandro Pascoli, Perugia, Italy. alessandro.paciaroni@unipg.it.ORCID http://orcid.org/0000-0002-3952-1634

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Protein diffusion, critical for cellular metabolism, occurs in the highly crowded cytoplasm. Understanding how this dynamics changes when organisms are adapted to different thermal niches is a fundamental challenge in microbiology and biophysics. In Escherichia coli, protein diffusion undergoes a pronounced slowdown at temperatures near cellular death, coinciding with the early stages of unfolding. To determine whether this phenomenon is universal, we investigated psychrophilic and hyperthermophilic bacteria. In both species, a marked diffusion slowdown takes place at the onset of proteome melting. However, while the dynamic arrest is associated with the thermal death point for the hyperthermophilic proteome, the psychrophilic proteome maintains substantial mobility well beyond the cellular inactivation. The decoupling between metabolic viability and proteome dynamics and stability suggests that the functional processes of psychrophilic bacteria are temperature sensitive. This finding echoes the behavior of psychrophilic enzymes, manifesting a large temperature gap between optimal activity and unfolding. Protein diffusion is optimized to maintain functional fluidity at the organism's working conditions, but its temperature dependence is controlled by the proteome folded state. Our findings redefine the relationship between cytoplasmic dynamics, proteome stability, and bacterial survival in cold environments.

Indexed as

Cold TemperatureCytoplasmEscherichia coliProteomeDiffusionEscherichia coli ProteinsMicrobial ViabilityProtein StabilityEscherichia coli ProteinsProteome

Identifiers

PMID41285768
PMCPMC12644737

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.