Evidence map›Paper›PMID 41281472›Full record

ArticleWorld journal of gastrointestinal oncology2025

5'-transfer RNA halve-lysine-CTT as a promising biomarker for early detection of hepatocellular carcinoma.

Jie Yuan, Wen-Chao Gu, Tian-Xin Xu, Xian-Juan Shen, Xian Li, Lei Shen, Yan Zhang, Shao-Qing Ju

Registry-linked trialAbstract read
In one paragraph

Article in World journal of gastrointestinal oncology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT07265271 (Project for Multi-Omics-Based Early Detection of Hepatocellular Carcinoma), which is not on this map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT07265271 recruitingnot on this map

Project for Multi-Omics-Based Early Detection of Hepatocellular Carcinoma (PROMETHEA Study)

TypeobservationalSponsorCity of Hope Medical CenterRan2025 to 2028Enrolled600ConditionsHepatocellular Carcinoma (HCC)ArmsSmall RNA sequence, Rt-qPCR
3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Jie YuanDepartment of Laboratory Medicine, Affiliated Hospital of Nantong University, Nantong 226001, Jiangsu Province, China.
Wen-Chao GuDepartment of Special Laboratory Center, Affiliated Hospital of Nantong University, Nantong 226001, Jiangsu Province, China.
Tian-Xin XuDepartment of General Surgery, Affiliated Hospital of Nantong University, Nantong 226001, Jiangsu Province, China.
Xian-Juan ShenDepartment of Laboratory Medicine, Affiliated Hospital of Nantong University, Nantong 226001, Jiangsu Province, China.
Xian LiDepartment of Laboratory Medicine, Affiliated Hospital of Nantong University, Nantong 226001, Jiangsu Province, China.
Lei ShenDepartment of Laboratory Medicine, Affiliated Hospital of Nantong University, Nantong 226001, Jiangsu Province, China.
Yan ZhangDepartment of Laboratory Medicine, Affiliated Hospital of Nantong University, Nantong 226001, Jiangsu Province, China.
Shao-Qing JuDepartment of Laboratory Medicine, Affiliated Hospital of Nantong University, Nantong 226001, Jiangsu Province, China. cherrysacrifice@163.com.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundHepatocellular carcinoma (HCC) is a globally prevalent malignancy associated with high morbidity and mortality. Transfer RNA (tRNA)-derived small RNAs (tsRNAs), a class of small non-coding RNAs originating from tRNA, have emerged as potential therapeutic targets in cancers, including HCC. However, the specific tsRNAs involved in HCC and their precise mechanisms remain largely unknown. In this study, we identify and characterize specific tsRNAs involved in the development and progression of HCC, discovering their potential as novel biomarkers for early detection and potential therapeutic targets.

aimTo investigate differentially expressed tsRNAs in HCC, identify potential biomarkers, and elucidate the functions and mechanisms of tsRNAs in HCC.

methodsDifferentially expressed tsRNAs in Barcelona Clinic Liver Cancer 0/A-stage HCC tissues were identified through high-throughput sequencing. Agarose gel electrophoresis, Sanger sequencing, and quantitative polymerase chain reaction were conducted to detect 5'-tRNA halve (tiRNA)-lysine (Lys)-CTT in tissues and serum samples. The diagnostic performance of 5'-tiRNA-Lys-CTT was evaluated using receiver operating characteristic analysis. HCC cell proliferation was examined using the Cell Counting Kit-8 assay, colony formation assay, and 5-ethynyl-2'-deoxyuridine staining. Additionally, the migratory capability of HCC cells was investigated using Transwell assays.

resultsThe 5'-tiRNA-Lys-CTT demonstrated excellent stability and can be easily detected. Its expression was significantly upregulated in 50 HCC tissues, 110 HCC serum samples, and 5 HCC cell lines

conclusionThe 5'-tiRNA-Lys-CTT levels were higher in early HCC patients. 5'-tiRNA-Lys-CTT is a promising diagnostic biomarker for early-stage HCC and may play an oncogenic role in HCC by interacting with downstream mRNA targets

Indexed as

5’-transfer RNA halve-lysine-CTTDiagnosis biomarkerHepatocellular carcinomaTransfer RNA-derived fragmentsTransfer RNA-derived small RNAs

Identifiers

PMID41281472
PMCPMC12635633

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Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.