Evidence map›Paper›PMID 41280249›Full record

ArticlePharmacogenomics and personalized medicine2025

Berberine Repairs Intestinal Mucosal Barrier by Targeting HSP90AA1 and MAPK14.

Danya Zhao, Yang Zhai, Chen Chen, Junkang Chen, Dongya Chen, Qiang Yang, Zhexuan Yu, Shisi Shao, Yao Huang, Jianlong Shu

Abstract read
In one paragraph

Article in Pharmacogenomics and personalized medicine, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Danya Zhao *Department of Gastroenterology, Hangzhou Red Cross Hospital/Hospital of Integrated Chinese and Western Medicine, Hangzhou, People's Republic of China.ORCID 0000-0003-2329-4390
Yang Zhai *Department of Chinese Medicine, Seventh People's Hospital of Nanning, Nanning, People's Republic of China.ORCID 0009-0009-4932-7737
Chen Chen *The First School of Clinical Medicine of Zhejiang Chinese Medical University, Hangzhou, People's Republic of China.
Junkang ChenDepartment of Gastroenterology, Pujiang County Hospital of Traditional Chinese Medicine, Jinhua, People's Republic of China.
Dongya ChenDepartment of Gastroenterology, Hangzhou Red Cross Hospital/Hospital of Integrated Chinese and Western Medicine, Hangzhou, People's Republic of China.
Qiang YangHangzhou TCM Hospital Affiliated with Zhejiang Chinese Medical University, Hangzhou, People's Republic of China.
Zhexuan YuThe First School of Clinical Medicine of Zhejiang Chinese Medical University, Hangzhou, People's Republic of China.
Shisi ShaoThe First School of Clinical Medicine of Zhejiang Chinese Medical University, Hangzhou, People's Republic of China.
Yao HuangThe First School of Clinical Medicine of Zhejiang Chinese Medical University, Hangzhou, People's Republic of China.
Jianlong ShuDepartment of Chinese Medicine, Seventh People's Hospital of Nanning, Nanning, People's Republic of China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: Berberine (BBR), a key compound in Coptis chinensis, has broad pharmacological properties, though its specific Crohn's disease (CD) targets and mechanisms are undefined. Materials and Methods: We employed network pharmacology, mendelian randomization (MR), molecular docking, and molecular dynamics simulations to identify potential target genes. Next, we assessed the efficacy of BBR in vitro and in vivo. Results: HSP90AA1 and MAPK14 were identified as potential target genes of BBR in the treatment of CD. In vitro experiments revealed that BBR downregulated LPS-induced HSP90AA1, MAPK14, and TNF-α while restoring tight junction proteins (ZO-1, Occludin, Claudin-1, JAM-A). Both HSP90AA1 inhibitor (17-AAG) and MAPK14 inhibitor (SB203580) significantly mitigated the reduction in ZO-1, Occludin, Claudin-1, and JAM-A expression caused by LPS. Furthermore, in vivo experiments revealed that BBR treatment effectively alleviated weight loss, the disease activity index (DAI), and colon shortening in a model of DSS-treated mice. BBR also ameliorated pathological changes in the colon, repaired goblet cells, reduced the expression of HSP90AA1, MAPK14, and TNF-α, and increased the expression of ZO-1, Occludin, Claudin-1, and JAM-A. Conclusion: BBR inhibits the expression of HSP90AA1 and MAPK14 both in vitro and in vivo, thereby facilitating the repair of the intestinal mucosal barrier.

Indexed as

berberineCrohn’s diseaseexperimental validationMendelian randomizationmolecular dynamics

Identifiers

PMID41280249
PMCPMC12630016

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.