Evidence map›Paper›PMID 41280017›Full record

ArticlebioRxiv : the preprint server for biology2025

Megaplasmids associate with

Allison K Guitor, Shuai Wang, Owen T Tuck, Brian Firek, Nadja Mostacci, April Jauhal, Lin-Xing Chen, Agata H Dziegiel, Stephen Baker, Vu Thuy Duong and 8 more

Abstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors.

Allison K GuitorDepartment of Earth and Planetary Sciences, University of California, Berkeley, CA, USA.ORCID 0000-0002-6290-6233
Shuai WangInnovative Genomics Institute, University of California, Berkeley, CA, USA.
Owen T TuckInnovative Genomics Institute, University of California, Berkeley, CA, USA.ORCID 0000-0002-0348-6910
Brian FirekDepartment of Surgery, University of Pittsburgh School of Medicine, Pittsburgh, PA 15213, USA.
Nadja MostacciInstitute for Infectious Diseases, Faculty of Medicine, University of Bern, Bern, Switzerland.ORCID 0000-0002-4534-2608
April JauhalInstitute for Systems Genetics, New York Grossman School of Medicine, New York University, New York, NY, USA.ORCID 0000-0003-3636-4765
Lin-Xing ChenState Key Laboratory of Advanced Environmental Technology, the Department of Environmental Science and Engineering, University of Science and Technology of China, Hefei, China, 230026.ORCID 0000-0003-2774-1952
Agata H DziegielMicrobes and Food Safety, Quadram Institute Bioscience, Norwich, UK.
Stephen BakerA*STAR Infectious Diseases Labs (A*STAR IDL), Agency for Science, Technology and Research (A*STAR), Singapore 138648, Singapore.
Vu Thuy DuongChildren's Hospital No. 1, Ho Chi Minh City, Vietnam.
Alison E MatherMicrobes and Food Safety, Quadram Institute Bioscience, Norwich, UK.ORCID 0000-0001-6513-3515
Jukka CoranderDepartment of Mathematics and Statistics University of Helsinki, Helsinki, Finland; Department of Biostatistics, University of Oslo, Oslo, Norway; Wellcome Sanger Institute, Hinxton, UK; Department of Genetics, University of Cambridge, Cambridge, UK.ORCID 0000-0002-7752-1942
Anu KanteleMeilahti Vaccine Research Center MeVac, Helsinki University Hospital and University of Helsinki, Helsinki, Finland.ORCID 0000-0002-0004-1000
Liat ShenhavInstitute for Systems Genetics, New York Grossman School of Medicine, New York University, New York, NY, USA.ORCID 0000-0003-1708-6050
Markus HiltyInstitute for Infectious Diseases, Faculty of Medicine, University of Bern, Bern, Switzerland.ORCID 0000-0002-2418-6474
Michael J MorowitzDivision of Pediatric General and Thoracic Surgery, University of Pittsburgh Children's Hospital, Pittsburgh, PA, USA.
Rohan SachdevaInnovative Genomics Institute, University of California, Berkeley, CA, USA.ORCID 0000-0001-9284-2245
Jillian F BanfieldDepartment of Earth and Planetary Sciences, University of California, Berkeley, CA, USA.ORCID 0000-0003-0406-9542

Funding

Population Genomic Analysis of Gut Microbial Colonization in Premature InfantsR01AI092531 · NIAID · UNIVERSITY OF CALIFORNIA BERKELEY · PI Jillian Banfield, Michael Morowitz · 2011 to 2026
$11.3M
NIAID NIH HHS R01 AI092531
6 · The paper itself

Abstract

Humans and animals are ubiquitously colonized by

Indexed as

antibiotic resistanceEnterobacteriaceaeEscherichia colihuman gut microbiomemegaplasmidsmethylationPlasmidspreterm infantsSalmonella entericasecretion systemsvirulence

Identifiers

PMID41280017
PMCPMC12633466

What OpenQuestion holds

Textmetadata
LicenceCC BY-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.