Evidence map›Paper›PMID 41279717›Full record

ArticlebioRxiv : the preprint server for biology2025

Proteome Landscapes Decode Organelle Vulnerabilities in cortical and dopaminergic-like induced neurons Across Lysosomal Storage Disorders.

Felix Kraus, Yuchen He, Yizhi Jiang, Delong Li, Yohannes A Ambaw, Federico M Gasparoli, Joao A Paulo, Tobias C Walther, Robert V Farese, Steven P Gygi and 2 more

Abstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

12 authors.

Felix KrausDepartment of Cell Biology, Harvard Medical School, Boston MA, USA.ORCID 0000-0002-3757-541X
Yuchen HeDepartment of Cell Biology, Harvard Medical School, Boston MA, USA.ORCID 0000-0002-6096-4915
Yizhi JiangDepartment of Cell Biology, Harvard Medical School, Boston MA, USA.ORCID 0000-0001-9016-1104
Delong LiAligning Science Across Parkinson's (ASAP) Collaborative Research Network, Chevy Chase, MD 20815, USA.ORCID 0009-0006-7900-489X
Yohannes A AmbawCell Biology Program, Sloan Kettering Institute, New York, NY, USA.ORCID 0009-0004-5806-5090
Federico M GasparoliDepartment of Cell Biology, Harvard Medical School, Boston MA, USA.ORCID 0000-0001-6865-2660
Joao A PauloDepartment of Cell Biology, Harvard Medical School, Boston MA, USA.ORCID 0000-0002-4291-413X
Tobias C WaltherCell Biology Program, Sloan Kettering Institute, New York, NY, USA.ORCID 0000-0003-1442-1327
Robert V FareseCell Biology Program, Sloan Kettering Institute, New York, NY, USA.ORCID 0000-0001-8103-2239
Steven P GygiDepartment of Cell Biology, Harvard Medical School, Boston MA, USA.ORCID 0000-0001-7626-0034
Florian WilflingAligning Science Across Parkinson's (ASAP) Collaborative Research Network, Chevy Chase, MD 20815, USA.ORCID 0000-0002-6559-7261
J Wade HarperDepartment of Cell Biology, Harvard Medical School, Boston MA, USA.ORCID 0000-0002-6944-7236

Funding

Endolysosomal Proteome Landscapes Through the Lens of Neurodegenerative Risk AllelesR01NS110395 · NINDS · HARVARD MEDICAL SCHOOL · PI JEFFREY W HARPER · 2018 to 2026
$4.1M
Regulation of PINK1 and PARKIN-Dependent MitophagyR01NS083524 · NINDS · HARVARD MEDICAL SCHOOL · PI HARPER, JEFFREY W · 2020 to 2024
$2.2M
Advancing Multiplexed Isobaric Tag-based Strategies for Proteome ProfilingR01GM132129 · NIGMS · HARVARD MEDICAL SCHOOL · PI PAULO, JOAO A · 2019 to 2023
$1.7M
NIGMS NIH HHS R01 GM132129NINDS NIH HHS R01 NS083524NINDS NIH HHS R01 NS110395
6 · The paper itself

Abstract

Lysosomes maintain cellular homeostasis by degrading proteins delivered via endocytosis and autophagy and recycling building blocks for organelle biogenesis. Lysosomal Storage Disorders (LSDs) comprise a broad group of diseases affecting lysosomal degradation, ion flux, and lipid catabolism. Within this group, sphingolipidoses genes involved in glycosphingolipid breakdown are known (

Indexed as

iDAiNeuronLysoIPLysosomal Storage DisorderLysosomeOrganelle quality controlProteomics

Identifiers

PMID41279717
PMCPMC12632377

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.