Evidence map›Paper›PMID 41279499›Full record

ArticlebioRxiv : the preprint server for biology2025

PlasmoFP: leveraging deep learning to predict protein function of uncharacterized proteins across the malaria parasite genus.

Harsh R Srivastava, Daniel Berenberg, Omar Qassab, Ziyi Wang, Richard Bonneau, Jane M Carlton

Abstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Harsh R SrivastavaCenter for Genomics and Systems Biology, Department of Biology, New York University, New York, NY, USA.ORCID 0000-0002-7295-6613
Daniel BerenbergCourant Institute, Department of Computer Science, New York University, New York, NY, USA.
Omar QassabCenter for Genomics and Systems Biology, Department of Biology, New York University, New York, NY, USA.
Ziyi WangJohns Hopkins Malaria Research Institute, Department of Molecular Microbiology and Immunology, Bloomberg School of Public Health, Johns Hopkins University, Baltimore, MD, USA.
Richard BonneauPrescient Design, gRED Computational Sciences, Genentech, New York, NY 10010, USA.ORCID 0000-0003-4354-7906
Jane M CarltonCenter for Genomics and Systems Biology, Department of Biology, New York University, New York, NY, USA.ORCID 0000-0001-9340-5020

Funding

Using Next-Generation Genomics to Study Antimalarial Drug Resistance in IndiaU19AI089676 · NIAID · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI CARLTON, JANE M · 2010 to 2023
$22.6M
The Quantitative Biological Systems Training (QBIST) ProgramT32GM132037 · NIGMS · NEW YORK UNIVERSITY · PI David Gresham, Christine Vogel · 2019 to 2026
$2.3M
NIAID NIH HHS U19 AI089676NIGMS NIH HHS T32 GM132037
6 · The paper itself

Abstract

The first malaria parasite

Identifiers

PMID41279499
PMCPMC12632808

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.