Evidence map›Paper›PMID 41279280›Full record

ArticlebioRxiv : the preprint server for biology2025

Combinatorial multiomic analysis from a pedigree of Sox10

Joseph T Benthal, Justin A Avila, Jeffrey R Smith, E Michelle Southard-Smith

Abstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

4 authors.

Joseph T BenthalProgram in Human Genetics, Vanderbilt University, Nashville, TN, USA.ORCID 0000-0002-7078-837X
Justin A AvilaVanderbilt Brain Institute, Vanderbilt University, Nashville, TN, USA.ORCID 0000-0002-8780-7610
Jeffrey R SmithGenetic Medicine, Vanderbilt University School of Medicine, Nashville, TN, USA.ORCID 0000-0001-8424-910X
E Michelle Southard-SmithProgram in Human Genetics, Vanderbilt University, Nashville, TN, USA.ORCID 0000-0003-4718-5869

Funding

Translational Analysis CoreP30DK058404 · NIDDK · VANDERBILT UNIVERSITY MEDICAL CENTER · PI MARY Kay WASHINGTON · 2002 to 2026
$29.9M
Training Program in Stem Cell and Regenerative Developmental BiologyT32HD007502 · NICHD · VANDERBILT UNIVERSITY · PI WRIGHT, CHRISTOPHER V · 1997 to 2022
$5.4M
Genetic Complexity and Modifiers of Hirschsprung DiseaseR01DK060047 · NIDDK · VANDERBILT UNIVERSITY · PI SOUTHARD-SMITH, E MICHELLE · 2002 to 2011
$3.6M
Mechanisms of Enteric Neuron DiversificationR01DK127178 · NIDDK · VANDERBILT UNIVERSITY MEDICAL CENTER · PI E Michelle SOUTHARD-SMITH · 2021 to 2026
$2.6M
Assessing Sox 10's effect on chromatin accessibility in enteric neuron lineage diversificationF31DK137637 · NIDDK · VANDERBILT UNIVERSITY · PI BENTHAL, JOSEPH T · 2023 to 2024
$67k
NICHD NIH HHS T32 HD007502NIDDK NIH HHS F31 DK137637NIDDK NIH HHS P30 DK058404NIDDK NIH HHS R01 DK060047NIDDK NIH HHS R01 DK127178
6 · The paper itself

Abstract

Background: Hirschsprung disease (HSCR) is characterized by absence of enteric ganglia (aganglionosis) along variable lengths of the distal intestine. This disorder results from deficient colonization of fetal intestine by enteric neural crest-derived cells (ENCDCs). HSCR exhibits complex, multifactorial inheritance with penetrance and severity varying widely even within a family. Results: To identify loci that modify aganglionosis extent we undertook genome-wide association study (GWAS) of an extended pedigree of Conclusions: This study identifies genome intervals and intrinsic genes that modify

Indexed as

autonomicDach1EdnrbEnteric Nervous Systemgenetic modifierGenome-wide association studyGWASHirschsprung diseaseinnervationintestinal aganglionosisintestinemouse modelPhox2bsingle cell RNA-sequencingSox10

Identifiers

PMID41279280
PMCPMC12637471

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.