Evidence map›Paper›PMID 41279217›Full record

ArticlebioRxiv : the preprint server for biology2025

Neurophysiology of mismatch negativity generation: a biophysical modeling study.

Carolina Fernandez Pujol, Joshua Bruce, Ryan V Thorpe, Stephanie R Jones, Andrew R Dykstra

Abstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Carolina Fernandez PujolDepartment of Biomedical Engineering, University of Miami, Coral Gables, FL, USA.ORCID 0009-0003-0611-1270
Joshua BruceDepartment of Biomedical Engineering, University of Miami, Coral Gables, FL, USA.
Ryan V ThorpeDepartment of Neuroscience, Brown University, Providence RI, USA.ORCID 0000-0003-2491-8599
Stephanie R JonesDepartment of Neuroscience, Brown University, Providence RI, USA.ORCID 0000-0001-6760-5301
Andrew R DykstraDepartment of Biomedical Engineering, University of Miami, Coral Gables, FL, USA.ORCID 0000-0001-8075-6374

Funding

Miami Clinical and Translational Science InstituteUL1TR002736 · NCATS · UNIVERSITY OF MIAMI SCHOOL OF MEDICINE · PI CARRASQUILLO, OLVEEN, KOBETZ, ERIN N · 2018 to 2022
$23.2M
Dissemination of the Human Neocortical Neurosolver (HNN) software for circuit level interpretation of human MEG/EEGU24NS129945 · NINDS · BROWN UNIVERSITY · PI STEPHANIE Ruggiano JONES · 2023 to 2026
$2.8M
Brown Postdoctoral Training Program in Computational PsychiatryT32MH126388 · NIMH · BROWN UNIVERSITY · PI MICHAEL J. FRANK, STEPHANIE Ruggiano JONES · 2021 to 2026
$2.1M
Training Program for Interactionist Cognitive Neuroscience (ICoN)T32MH115895 · NIMH · BROWN UNIVERSITY · PI MICHAEL J. FRANK, STEPHANIE Ruggiano JONES · 2019 to 2026
$1.8M
NCATS NIH HHS UL1 TR002736NIMH NIH HHS T32 MH115895NIMH NIH HHS T32 MH126388NINDS NIH HHS U24 NS129945
6 · The paper itself

Abstract

The mismatch negativity, or MMN, is a ubiquitous evoked brain response elicited by any discriminable change of an otherwise regular stimulus sequence. Despite its potential clinical relevance - the MMN is known to be affected by brain state, lesions, and neurologic/psychiatric disorders - and a growing body of animal work, the underlying neurophysiology of the MMN is not well understood. This hinders translation of circuit-level animal findings and mitigates the utility of the MMN as a neurologic/psychiatric biomarker. Here, we used biophysical modeling to examine the neurophysiological basis of the MMN as measured in a canonical auditory oddball paradigm with frequency deviants (i.e., tones whose frequency was shifted slightly with respect to standard tones). The response to standards was successfully modeled by a typical feedforward-followed-by-feedback input sequence. The response to deviants required additional, prolonged input to supragranular layers, consistent with input from the non-lemniscal thalamus. This additional input resulted in downward-going pyramidal-neuron currents in both layer 2/3 (via indirect somatic inhibition)

Identifiers

PMID41279217
PMCPMC12637574

What OpenQuestion holds

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LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.