Evidence map›Paper›PMID 41278967›Full record

ArticlebioRxiv : the preprint server for biology2025

Hybrid Solid-Liquid Optics Enable Scalable, High-Resolution, Multi-Immersion Light-Sheet Microscopy.

Cheng Gong, Pauline Affatato, Matt Fay, Sudha R Guttikonda, Nathan J O'Connor, Emerson Noble, Maci Heal, Benjamin Haydock, Renee Mapa, Estanislao Daniel De La Cruz and 8 more

Abstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

18 authors.

Cheng GongDepartments of Biological Sciences, Columbia University, New York, NY, USA.
Pauline AffatatoDepartments of Biological Sciences, Columbia University, New York, NY, USA.
Matt FayMBF Bioscience, Williston, VT, USA.
Sudha R GuttikondaDepartment of Psychiatry, New York State Psychiatric Institute, Columbia University, New York, NY, USA.
Nathan J O'ConnorMBF Bioscience, Williston, VT, USA.
Emerson NobleMBF Bioscience, Williston, VT, USA.
Maci HealMBF Bioscience, Williston, VT, USA.
Benjamin HaydockMBF Bioscience, Williston, VT, USA.
Renee MapaDepartment of Biological Sciences, Lehigh University, Bethlehem, Pennsylvania, USA.
Estanislao Daniel De La CruzDepartments of Biological Sciences, Columbia University, New York, NY, USA.
Johanna E KowalkoDepartment of Biological Sciences, Lehigh University, Bethlehem, Pennsylvania, USA.
Maria Antonietta ToschesDepartments of Biological Sciences, Columbia University, New York, NY, USA.
Charles R GerfenSection on Neuroanatomy, National Institute of Mental Health, Bethesda, MD, USA.
Rene HenDepartment of Psychiatry, New York State Psychiatric Institute, Columbia University, New York, NY, USA.
Christopher D MakinsonDepartment of Neurology, Vagelos College of Physicians and Surgeons, Columbia University Irving Medical Center, New York, NY, USA.
Hanina HibshooshDepartment of Pathology and Cell Biology, Columbia University Irving Medical Center, New York, NY, USA.
Jack GlaserMBF Bioscience, Williston, VT, USA.
Raju TomerDepartments of Biological Sciences, Columbia University, New York, NY, USA.

Funding

Tumor Biology and Microenvironment ProgramP30CA013696 · NCI · COLUMBIA UNIV NEW YORK MORNINGSIDE · PI Anil K Rustgi · 1985 to 2026
$115.3M
Functional Organization Of The Cerebral Cortex and Basal GangliaZIAMH002497 · NIMH · NATIONAL INSTITUTE OF MENTAL HEALTH · PI GERFEN, CHARLES R · 2009 to 2025
$18.3M
RNA Programmable and Scalable Brain Cell Type Tools Across VertebratesU01MH139723 · NIMH · DUKE UNIVERSITY · PI Fei Chen, Guoping Feng · 2025 to 2026
$5.7M
PRIMING THE PUMP: TRAINING PHYSICIAN-SCIENTISTS IN TRANSLATIONAL PSYCHIATRYR25MH086466 · NIMH · NEW YORK STATE PSYCHIATRIC INSTITUTE DBA RESEARCH FOUNDATION FOR MENTAL HYGIENE, INC · PI Melissa Arbuckle, Eduardo David Leonardo · 2009 to 2026
$4.3M
NeuroExMR42MH124566 · NIMH · MICROBRIGHTFIELD, LLC · PI GLASER, JACOB R · 2021 to 2024
$3.7M
A comparative approach for decomposing the mammalian brain architectural complexityDP2MH119423 · NIMH · COLUMBIA UNIV NEW YORK MORNINGSIDE · PI TOMER, RAJU · 2018 to 2018
$2.4M
Evolutionary approaches to identify genetic architecture regulating aggressionR35GM138345 · NIGMS · LEHIGH UNIVERSITY · PI KOWALKO, JOHANNA E. · 2020 to 2024
$2.0M
Intramural NIH HHS ZIA MH002497NCI NIH HHS P30 CA013696NIGMS NIH HHS R35 GM138345NIMH NIH HHS DP2 MH119423NIMH NIH HHS R25 MH086466NIMH NIH HHS R42 MH124566NIMH NIH HHS U01 MH139723
6 · The paper itself

Abstract

Modern biology increasingly depends on data-driven discovery, requiring scalable and affordable high-content 3D imaging across molecular to organ scales. Although tissue clearing, expansion microscopy, and light-sheet microscopy (LSM) enable subcellular-resolution imaging of intact specimens, their scalability remains fundamentally limited by detection optics: immersion objectives deliver high-resolution, aberration-free imaging but with short working distances, high cost, and multi-immersion incompatibility, while air objectives offer long working distances and portability at lower cost but suffer from severe aberrations and reduced photon collection when imaging immersed samples. We introduce the Hybrid Solid-Liquid Immersion Lens (HySIL) framework, which pairs an off-the-shelf solid optical component with a refractive index-matched liquid to precompensate aberrations and enhance resolution. Building on HySIL, we developed SCOPE and Super-SCOPE, objective-agnostic imaging devices achieving submicron lateral resolution (<0.75 μm) across centimeter-scale samples using inexpensive air objectives with >30 mm working distances. Integration with a low-cost LSM platform yielded a compact, scalable system demonstrated for multi-immersion, multi-color, subcellular-resolution mapping of cleared or expanded mouse, salamander, and cavefish brains, human iPSC-derived organoids, and 3D histopathology of breast tissue. HySIL and SCOPE establish an accessible foundation for scalable, high-resolution volumetric imaging, advancing data-driven biological discovery.

Identifiers

PMID41278967
PMCPMC12637728

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.