Evidence map›Paper›PMID 41278866›Full record

ArticlebioRxiv : the preprint server for biology2025

Map of spiking activity underlying change detection in the mouse visual system.

Corbett Bennett, Sam Gale, Gregg Heller, Tamina Ramirez, Hannah Belski, Alex Piet, Omid Zobeiri, Adam Amster, Anton Arkhipov, Alex Cahoon and 39 more

Abstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

49 authors.

Corbett BennettAllen Institute, Seattle, WA 98109.ORCID 0009-0001-2847-7754
Sam GaleAllen Institute, Seattle, WA 98109.
Gregg HellerAllen Institute, Seattle, WA 98109.ORCID 0000-0003-3552-996X
Tamina RamirezAllen Institute, Seattle, WA 98109.ORCID 0000-0002-6569-5291
Hannah BelskiAllen Institute, Seattle, WA 98109.
Alex PietAllen Institute, Seattle, WA 98109.ORCID 0000-0002-6529-1414
Omid ZobeiriAllen Institute, Seattle, WA 98109.
Adam AmsterAllen Institute, Seattle, WA 98109.
Anton ArkhipovAllen Institute, Seattle, WA 98109.
Alex CahoonAllen Institute, Seattle, WA 98109.
Shiella CaldejonAllen Institute, Seattle, WA 98109.
Mikayla CarlsonAllen Institute, Seattle, WA 98109.ORCID 0009-0003-7019-2781
Linzy CasalAllen Institute, Seattle, WA 98109.
Scott DanielAllen Institute, Seattle, WA 98109.
Colin FarrellAllen Institute, Seattle, WA 98109.
Marina GarrettAllen Institute, Seattle, WA 98109.
Ryan GillisAllen Institute, Seattle, WA 98109.
Conor GrassoAllen Institute, Seattle, WA 98109.ORCID 0009-0003-6384-4075
Ben HardcastleAllen Institute, Seattle, WA 98109.ORCID 0000-0002-4819-5631
Ross HytnenAllen Institute, Seattle, WA 98109.
Tye JohnsonAllen Institute, Seattle, WA 98109.ORCID 0009-0006-7239-7571
Peter LedochowitschAllen Institute, Seattle, WA 98109.ORCID 0000-0003-0835-3444
Quinn L'HeureuxAllen Institute, Seattle, WA 98109.ORCID 0000-0002-3376-2031
Dana MastrovitoAllen Institute, Seattle, WA 98109.
Ethan McBrideAllen Institute, Seattle, WA 98109.ORCID 0000-0001-9489-2828
Stefan MihalasAllen Institute, Seattle, WA 98109.
Chris MochizukiAllen Institute, Seattle, WA 98109.
Chris MorrisonAllen Institute, Seattle, WA 98109.
Chelsea NayanAllen Institute, Seattle, WA 98109.
Kiet NgoAllen Institute, Seattle, WA 98109.
Kat NorthAllen Institute, Seattle, WA 98109.
Doug OllerenshawAllen Institute, Seattle, WA 98109.
Ben OuelletteAllen Institute, Seattle, WA 98109.ORCID 0000-0003-4913-554X
Paul RhoadsAllen Institute, Seattle, WA 98109.
Kara RonellenfitchAllen Institute, Seattle, WA 98109.
Martin SchroedterAllen Institute, Seattle, WA 98109.
Joshua H SiegleAllen Institute, Seattle, WA 98109.ORCID 0000-0002-7736-4844
Cliff SlaughterbeckAllen Institute, Seattle, WA 98109.
David SullivanAllen Institute, Seattle, WA 98109.
Jackie SwappAllen Institute, Seattle, WA 98109.ORCID 0009-0008-4965-6242
Mike TaorminaAllen Institute, Seattle, WA 98109.
Wayne WakemanAllen Institute, Seattle, WA 98109.
Xana WaughmanAllen Institute, Seattle, WA 98109.
Ali WillifordAllen Institute, Seattle, WA 98109.ORCID 0009-0000-7282-7515
John PhillipsAllen Institute, Seattle, WA 98109.ORCID 0000-0003-1080-7556
Peter A GroblewskiAllen Institute, Seattle, WA 98109.ORCID 0000-0002-8415-1118
Severine DurandAllen Institute, Seattle, WA 98109.ORCID 0000-0001-7788-0200
Christof KochAllen Institute, Seattle, WA 98109.
Shawn R OlsenAllen Institute, Seattle, WA 98109.ORCID 0000-0002-9568-7057

Funding

Bridging Function, Connectivity, and Transcriptomics of Mouse Cortical NeuronsU01MH130907 · NIMH · ALLEN INSTITUTE · PI ANTON ARKHIPOV, MARINA E. GARRETT · 2022 to 2026
$12.5M
NIMH NIH HHS U01 MH130907
6 · The paper itself

Abstract

Visual behavior requires coordinated activity across hierarchically organized brain circuits. Understanding this complexity demands datasets that are both large-scale (sampling many areas) and dense (recording many neurons in each area). Here we present a database of spiking activity across the mouse visual system-including thalamus, cortex, and midbrain-while mice perform an image change detection task. Using Neuropixels probes, we record from >75,000 high-quality units in 54 mice, mapping area-, cortical layer-, and cell type-specific coding of sensory and motor information. Modulation by task-engagement increased across the thalamocortical hierarchy but was strongest in the midbrain. Novel images modulated cortical (but not thalamic) responses through delayed recurrent activity. Population decoding and optogenetics identified a critical decision window for change detection and revealed that mice use an adaptation-based rather than image-comparison strategy. This comprehensive resource provides a valuable substrate for understanding sensorimotor computations in neural networks.

Identifiers

PMID41278866
PMCPMC12632887

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.